Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YRF1-3, YRF1-7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [637..1859] | [1..1224] |
|
|
0.0 | [179..1859] | [1..1681] |
|
Region A: Residues: [1-273] |
1 11 21 31 41 51
| | | | | |
1 MEIENEQICT CIAQILHLLN SLIITFLDDD KTETGQSFVY IDGFLVKKHN NQHTIVNFET 60
61 YKNKMKVSDR RKFEKANFDE FESALNNKND LVHCPSITLF ESIPTEVRSF YEDEKSGLIK 120
121 VVKFRTGAMD RKRSFEKIVV SVMVGKNVQK FLTFVEDEPD FQGGPIPSKY LIPKKINLMV 180
181 YTLFQVHTLK FNRKDYDTLS LFYLNRGYYN ELSFRVLERC YEIASARPND SSTMRTFTDF 240
241 VSGTPIVRGL QKSTIRKYGY NLAPYMFLLL HVD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [274-571] |
1 11 21 31 41 51
| | | | | |
1 ELSIFSAYQA SLPGEKKVDT ERLKRDLCPR KPTEIKYFSQ ICNDMMNKKD RLGDILHIIL 60
61 RACALNFGAG PRGGAGDEED RSITNEEPII PSVDEHGLKV CKLRSPNTPR RLRKTLDAVK 120
121 ALLVSSCACT ARDLDIFDDN NGVAMWKWIK ILYHEVAQET ALKDSYRITL VPSSDGVSVC 180
181 GKLFNREYVR GFYFACKAQF DNLWEELNDC FYMPTVVDIA SLILRNREVL FREPKRGIDE 240
241 YLENDSFLQM IPVKYREIVL PKLRRDTNKM TAALKNKVTV AIDELTVPLM WMIHFAVG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [572-751] |
1 11 21 31 41 51
| | | | | |
1 YPYRYPELQL LAFAGPQRNV YVDDTTRRIQ LYTDYNKNGS SEPRLKTLDG LTSDYVFYFV 60
61 TVLRQMQICA LGNSYDAFNH DPWMDVVGFE DPDQVTNRDI SRIVLYSYMF LNTAKGCLVE 120
121 YATFRQYMRE LPKNAPQKLN FREMRQGLIA LGRHCVGSRF ETDLYESATS ELMANHSVQT 180
181
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [752-1268] |
1 11 21 31 41 51
| | | | | |
1 GRNIYGVDSF SLTSVSGTTA TLLQERASER WIQWLGLESD YHCSFSSTRN AEDVVAGEAA 60
61 SSDHHQKISR VTRKRPREPK STNDILVAGQ KLFGSSFEFR DLHQLRLCHE IYMADTPSVA 120
121 VQAPPGYGKT ELFHLPLIAL ASKGDVKYVS FLFVPYTVLL ANCMIRLSRC GCLNVAPVRN 180
181 FIEEGCDGVT DLYVGIYDDL ASTNFTDRIA AWENIVECTF RTNNVKLGYL IVDEFHNFET 240
241 EVYRQSQFGG ITNLDFDAFE KAIFLSGTAP EAVADAALQR IGLTGLAKKS MDINELKRSE 300
301 DLSRGLSSYP TRMFNLIKEK SEVPLGHVHK IWKKVESQPE EALKLLLALF EIEPESKAIV 360
361 VASTTNEVEE LACSWRKYFR VVWIHGKLGA AEKVSRTKEF VTDGSMRVLI GTKLVTEGID 420
421 IKQLMMVIML DNRLNIIELI QGVGRLRDGG LCYLLSRKNS WAARNRKGEL PPIKEGCITE 480
481 QVREFYGLES KKGKKGQHVG CCGSRTDLSA DTVELIE
|
| Detection Method: | |
| Confidence: | 160.228787 |
| Match: | 1fuuA_ |
| Description: | Initiation factor 4a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1269-1602] |
1 11 21 31 41 51
| | | | | |
1 RMDRLAEKQA TASMSIVALP SSFQESNSSD RCRKYCSSDE DSDTCIHGSA NASTNATTNS 60
61 STNATTTAST NVRTSATTTA SINVRTSATT TESTNSSTNA TTTASTNVRT SATTTASINV 120
121 RTSATTTEST NSNTSATTTE STDSNTSATT TESTDSNTSA TTTASTNSST NATTTASTNS 180
181 STNATTTEST NASAKEDANK DGNAEDNRFH PVTDINKESY KRKGSQMVLL ERKKLKAQFP 240
241 NTSENMNVLQ FLGFRSDEIK HLFLYGIDVY FCPEGVFTQY GLCKGCQKMF ELCVCWAGQK 300
301 VSYRRMAWEA LAVERMLRND EEYKEYLEDI EPYH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1603-1859] |
1 11 21 31 41 51
| | | | | |
1 GDPVGYLKYF SVKRGEIYSQ IQRNYAWYLA ITRRRETISV LDSTRGKQGS QVFRMSGRQI 60
61 KELYYKVWSN LRESKTEVLQ YFLNWDEKKC REEWEAKDDT VFVEALEKVG VFQRLRSMTS 120
121 AGLQGPQYVK LQFSRHHRQL RSRYELSLGM HLRDQLALGV TPSKVPHWTA FLSMLIGLFC 180
181 NKTFRQKLEY LLEQISEVWL LPHWLDLANV EVLAADNTRV PLYMLMVAVH KELDSDDVPD 240
241 GRFDILLCRD SSREVGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1303-1526] |
1 11 21 31 41 51
| | | | | |
1 YCSSDEDSDT CIHGSANAST NATTNSSTNA TTTASTNVRT SATTTASINV RTSATTTEST 60
61 NSSTNATTTA STNVRTSATT TASINVRTSA TTTESTNSNT SATTTESTDS NTSATTTEST 120
121 DSNTSATTTA STNSSTNATT TASTNSSTNA TTTESTNASA KEDANKDGNA EDNRFHPVTD 180
181 INKESYKRKG SQMVLLERKK LKAQFPNTSE NMNVLQFLGF RSDE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1527-1766] |
1 11 21 31 41 51
| | | | | |
1 IKHLFLYGID VYFCPEGVFT QYGLCKGCQK MFELCVCWAG QKVSYRRMAW EALAVERMLR 60
61 NDEEYKEYLE DIEPYHGDPV GYLKYFSVKR GEIYSQIQRN YAWYLAITRR RETISVLDST 120
121 RGKQGSQVFR MSGRQIKELY YKVWSNLRES KTEVLQYFLN WDEKKCREEW EAKDDTVFVE 180
181 ALEKVGVFQR LRSMTSAGLQ GPQYVKLQFS RHHRQLRSRY ELSLGMHLRD QLALGVTPSK 240
241
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1767-1859] |
1 11 21 31 41 51
| | | | | |
1 VPHWTAFLSM LIGLFCNKTF RQKLEYLLEQ ISEVWLLPHW LDLANVEVLA ADNTRVPLYM 60
61 LMVAVHKELD SDDVPDGRFD ILLCRDSSRE VGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
