YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YGR242W
Organism: Saccharomyces cerevisiae
Length: 102 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for YGR242W.

Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQAVSDNLI SNAWVISCNP LALEVPERIG STYFCFGGAI FILVAPLTNL VYNEDIVSQT  60
   61 RLYIYYRGSR DSRACMLDIV TLVDVSKRSK LVLLLQIYFF SF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.757 b.40.2 Bacterial enterotoxins
View Download 0.629 d.8.1 Urease, gamma-subunit
View Download 0.629 d.8.1 Urease, gamma-subunit
View Download 0.554 b.40.2 Bacterial enterotoxins
View Download 0.437 d.38.1 Thioesterase/thiol ester dehydrase-isomerase
View Download 0.412 d.110.3 PYP-like sensor domain (PAS domain)
View Download 0.412 d.110.3 PYP-like sensor domain (PAS domain)
View Download 0.389 d.110.3 PYP-like sensor domain (PAS domain)
View Download 0.389 d.110.3 PYP-like sensor domain (PAS domain)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle