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View Structure Prediction Details

Protein: YGR228W
Organism: Saccharomyces cerevisiae
Length: 114 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YGR228W.

Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIVIFHKAI FSNSSLASST LASSLLISFS SFLFISSVCL FTSSSFFADS VTCSFSTCSF  60
   61 SSTFGCFSSS FLSLSCLMST LSALISCSAC PRLSVFTVVV SASLGSVFTI LTDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.919 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.919 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.861 a.7.1 Spectrin repeat
View Download 0.861 a.7.1 Spectrin repeat
View Download 0.792 a.8.4 Description not found.
View Download 0.752 a.8.4 Description not found.
View Download 0.750 d.164.1 SMAD MH1 domain
View Download 0.731 a.4.5 "Winged helix" DNA-binding domain
View Download 0.731 a.4.5 "Winged helix" DNA-binding domain
View Download 0.684 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle