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View Structure Prediction Details

Protein: YGR190C
Organism: Saccharomyces cerevisiae
Length: 121 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YGR190C.

Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSCSVSSLR RKRSEEVISF VVWFMPGESL LLNGNAESVL EVSSVTNVVD SFSFSKAGEV  60
   61 AGLNPSTTSA QYSFFNGFLG IFDFEVVYLY LCTNESDSDN IIRQKNLGRT MNCNNADDML 120
  121 F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.508 d.110.1 Profilin (actin-binding protein)
View Download 0.430 a.4.5 "Winged helix" DNA-binding domain
View Download 0.409 b.60.1 Lipocalins
View Download 0.403 a.36.1 Signal peptide-binding domain
View Download 0.403 a.36.1 Signal peptide-binding domain
View Download 0.393 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.393 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.363 a.1.1 Globin-like
View Download 0.358 a.1.1 Globin-like
View Download 0.342 a.60.9 lambda integrase-like, N-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle