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View Structure Prediction Details

Protein: CRH1
Organism: Saccharomyces cerevisiae
Length: 507 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRH1.

Description E-value Query
Range
Subject
Range
XTH4_ARATH - Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1
2.0E-77 [26..296] [1..274]
gi|8886865 - gi|8886865|gb|AAF80590.1|AF223419_1 xyloglucan endotransglycosylase XET1 [Asparagus officinalis]
9.0E-77 [59..296] [23..264]
gi|3986172 - gi|3986172|dbj|BAA34946.1| EXGT1 [Pisum sativum]
1.0E-75 [34..296] [3..271]
gi|3043422 - gi|3043422|emb|CAA06217.1| xyloglucan endotransglucosylase/hydrolase [Cicer arietinum]
1.0E-75 [31..296] [2..273]
gi|950299 - gi|950299|gb|AAC09388.1| xyloglucan endotransglycosylase precursor [Actinidia deliciosa]
2.0E-75 [41..296] [15..271]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-74 [41..296] [15..271]

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Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLDLLTVL SASSLLSTFA AAESTATADS TTAASSTASC NPLKTTGCTP DTALATSFSE  60
   61 DFSSSSKWFT DLKHAGEIKY GSDGLSMTLA KRYDNPSLKS NFYIMYGKLE VILKAANGTG 120
  121 IVSSFYLQSD DLDEIDIEWV GGDNTQFQSN FFSKGDTTTY DRGEFHGVDT PTDKFHNYTL 180
  181 DWAMDKTTWY LDGESVRVLS NTSSEGYPQS PMYLMMGIWA GGDPDNAAGT IEWAGGETNY 240
  241 NDAPFTMYIE KVIVTDY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 205.751666
Match: 2ayh__
Description: Bacillus 1-3,1-4-beta-glucanase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [258-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STGKKYTYGD QSGSWESIEA DGGSIYGRYD QAQEDFAVLA NGGSISSSST SSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 200.9897
Match: 1cpm__
Description: Bacillus 1-3,1-4-beta-glucanase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [311-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVSSSASSTV SSSVSSTVSS SASSTVSSSV SSTVSSSSSV SSSSSTSPSS STATSSKTLA  60
   61 SSSVTTSSSI SSFEKQSSSS SKKTVASSST SESIISSTKT PATVSSTTRS TVAPTTQQSS 120
  121 VSSDSPVQDK GGVATSSNDV TSSTTQISSK YTSTIQSSSS EASSTNSVQI SNGADLAQSL 180
  181 PREGKLFSVL VALLALL

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 14.94
Match: 1k83A
Description: RBP1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle