YRC Public Data Repository - Protein Structure Prediction

Protein:	QCR9
Organism:	Saccharomyces cerevisiae
Length:	66 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QCR9.

Description	E-value	Query Range	Subject Range
QCR9_MOUSE - Cytochrome b-c1 complex subunit 9 OS=Mus musculus GN=Uqcr10 PE=1 SV=1	7.0E-20	[4..60]	[8..64]
gi\|3659967, gi\|5... - gi\|5822457\|pdb\|2BCC\|A Chain A, Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken, gi\|3660376\|pd...	5.0E-19	[4..59]	[7..62]
UCRX_BOVIN, UCR1... - (P00130) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein (EC 1.10.2.2) (Cytochrome C1, nonh...	6.0E-19	[4..59]	[7..62]
gi\|114685787, gi... - gi\|114685789\|ref\|XP_001137262.1\| PREDICTED: ubiquinol-cytochrome c reductase complex 7.2kDa protein ... UQCR10 - ubiquinol-cytochrome c reductase, complex III subunit X	5.0E-18	[4..59]	[8..63]
gi\|9297067 - gi\|9297067\|sp\|O74433.2\|QCR9_SCHPO RecName: Full=Cytochrome b-c1 complex subunit 9; AltName: Full=Ubi... QCR9_SCHPO - Cytochrome b-c1 complex subunit 9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr9 PE=...	5.0E-17	[1..66]	[1..66]
gi\|11248896, gi\|... - gi\|7669947\|emb\|CAB89234.1\| ubiquinol--cytochrome-c reductase-like protein [Arabidopsis thaliana], gi...	4.0E-15	[2..52]	[12..62]
QCR9_YEAST - Cytochrome b-c1 complex subunit 9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR9 P... QCR9 - Subunit 9 of the ubiquinol cytochrome-c reductase complex, which is a component of the mitochondrial... gi\|151943460 - gi\|151943460\|gb\|EDN61771.1\| ubiquinol-cytochrome c oxidoreductase complex subunit [Saccharomyces cer...	3.0E-14	[1..56]	[1..56]
QCR9_SOLTU - Cytochrome b-c1 complex subunit 9 OS=Solanum tuberosum PE=1 SV=1	9.0E-14	[4..52]	[14..62]

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Predicted Domain #1

Region A:
Residues: [1-66]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSSLYKTF FKRNAVFVGT IFAGAFVFQT VFDTAITSWY ENHNKGKLWK DVKARIAAGD  60
   61 GDDDDE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	221.38764
Match:	1kyoI_
Description:	Subunit X (nonheme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.015349122465922	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: