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View Structure Prediction Details

Protein: YGR176W
Organism: Saccharomyces cerevisiae
Length: 115 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR176W.

Description E-value Query
Range
Subject
Range
gi|171470 - gi|171470|gb|AAA34591.1| ORF [Saccharomyces cerevisiae]
98.0 [0..1] [55..1]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRLRAYCVI SALSDTLLAF CTSSAELYEG PLRQYRIKAT QIRRWFGRRA CRTIPIRHDP  60
   61 VECPEPRSCP CSYHSRLWSK RLGRTQISRR LQTARRLNPE RSTAWSYLAR QVLYY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.500 a.4.1 Homeodomain-like
View Download 0.436 a.25.1 Ferritin-like
View Download 0.345 a.24.3 Cytochromes
View Download 0.345 a.24.3 Cytochromes
View Download 0.313 d.17.4 NTF2-like
View Download 0.311 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.280 a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle