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View Structure Prediction Details

Protein: YGR164W
Organism: Saccharomyces cerevisiae
Length: 111 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR164W.

Description E-value Query
Range
Subject
Range
gi|1945335 - gi|1945335|emb|CAA97190.1| unnamed protein product [Saccharomyces cerevisiae]
103.0 [0..58] [111..1]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVEPMTKPR KPTVQRCQSF FTNGANHFYC KKSTHDGGRT HNLLIRSQTR CHYATRATVC  60
   61 WKFSIINKYI PTLANITITT LRKLYKRFID RESLFLIFFR KDEHIVQNII N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.770 d.93.1 SH2 domain
View Download 0.770 d.93.1 SH2 domain
View Download 0.729 d.93.1 SH2 domain
View Download 0.729 d.93.1 SH2 domain
View Download 0.722 d.93.1 SH2 domain
View Download 0.722 d.93.1 SH2 domain
View Download 0.687 d.93.1 SH2 domain
View Download 0.687 d.93.1 SH2 domain
View Download 0.661 d.98.2 Description not found.
View Download 0.627 d.109.1 Actin depolymerizing proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle