| Protein: | CHO2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 869 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHO2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..869] | [1..869] |
|
|
0.0 | [85..867] | [127..895] |
|
|
0.0 | [88..867] | [1..766] |
|
Region A: Residues: [1-869] |
1 11 21 31 41 51
| | | | | |
1 MSSCKTTLSE MVGSVTKDRG TINVEARTRS SNVTFKPPVT HDMVRSLFDP TLKKSLLEKC 60
61 IALAIISNFF ICYWVFQRFG LQFTKYFFLV QYLFWRIAYN LGIGLVLHYQ SHYETLTNCA 120
121 KTHAIFSKIP QNKDANSNFS TNSNSFSEKF WNFIRKFCQY EIRSKMPKEY DLFAYPEEIN 180
181 VWLIFRQFVD LILMQDFVTY IIYVYLSIPY SWVQIFNWRS LLGVILILFN IWVKLDAHRV 240
241 VKDYAWYWGD FFFLEESELI FDGVFNISPH PMYSIGYLGY YGLSLICNDY KVLLVSVFGH 300
301 YSQFLFLKYV ENPHIERTYG DGTDSDSQMN SRIDDLISKE NYDYSRPLIN MGLSFNNFNK 360
361 LRFTDYFTIG TVAALMLGTI MNARFINLNY LFITVFVTKL VSWLFISTIL YKQSQSKWFT 420
421 RLFLENGYTQ VYSYEQWQFI YNYYLVLTYT LMIIHTGLQI WSNFSNINNS QLIFGLILVA 480
481 LQTWCDKETR LAISDFGWFY GDFFLSNYIS TRKLTSQGIY RYLNHPEAVL GVVGVWGTVL 540
541 MTNFAVTNII LAVLWTLTNF ILVKFIETPH VNKIYGKTKR VSGVGKTLLG LKPLRQVSDI 600
601 VNRIENIIIK SLVDESKNSN GGAELLPKNY QDNKEWNILI QEAMDSVATR LSPYCELKIE 660
661 NEQVETNFVL PTPVTLNWKM PIELYNGDDW IGLYKVIDTR ADREKTRVGS GGHWSATSKD 720
721 SYMNHGLRHK ESVTEIKATE KYVQGKVTFD TSLLYFENGI YEFRYHSGNS HKVLLISTPF 780
781 EISLPVLNTT TPELFEKDLT EFLTKVNVLK DGKFRPLGNK FFGMDSLKQL IKNSIGVELS 840
841 SEYMRRVNGD AHVISHRAWD IKQTLDSLA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [138-345] |
1 11 21 31 41 51
| | | | | |
1 NFSTNSNSFS EKFWNFIRKF CQYEIRSKMP KEYDLFAYPE EINVWLIFRQ FVDLILMQDF 60
61 VTYIIYVYLS IPYSWVQIFN WRSLLGVILI LFNIWVKLDA HRVVKDYAWY WGDFFFLEES 120
121 ELIFDGVFNI SPHPMYSIGY LGYYGLSLIC NDYKVLLVSV FGHYSQFLFL KYVENPHIER 180
181 TYGDGTDSDS QMNSRIDDLI SKENYDYS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [346-580] |
1 11 21 31 41 51
| | | | | |
1 RPLINMGLSF NNFNKLRFTD YFTIGTVAAL MLGTIMNARF INLNYLFITV FVTKLVSWLF 60
61 ISTILYKQSQ SKWFTRLFLE NGYTQVYSYE QWQFIYNYYL VLTYTLMIIH TGLQIWSNFS 120
121 NINNSQLIFG LILVALQTWC DKETRLAISD FGWFYGDFFL SNYISTRKLT SQGIYRYLNH 180
181 PEAVLGVVGV WGTVLMTNFA VTNIILAVLW TLTNFILVKF IETPHVNKIY GKTKR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [581-869] |
1 11 21 31 41 51
| | | | | |
1 VSGVGKTLLG LKPLRQVSDI VNRIENIIIK SLVDESKNSN GGAELLPKNY QDNKEWNILI 60
61 QEAMDSVATR LSPYCELKIE NEQVETNFVL PTPVTLNWKM PIELYNGDDW IGLYKVIDTR 120
121 ADREKTRVGS GGHWSATSKD SYMNHGLRHK ESVTEIKATE KYVQGKVTFD TSLLYFENGI 180
181 YEFRYHSGNS HKVLLISTPF EISLPVLNTT TPELFEKDLT EFLTKVNVLK DGKFRPLGNK 240
241 FFGMDSLKQL IKNSIGVELS SEYMRRVNGD AHVISHRAWD IKQTLDSLA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
