Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL24B.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..1] | [108..122] |
|
|
172.0 | [0..1] | [110..155] |
|
|
167.0 | [0..1] | [141..23] |
|
|
167.0 | [0..1] | [144..1] |
|
|
163.0 | [0..1] | [149..1] |
|
|
163.0 | [0..1] | [141..1] |
|
|
162.0 | [0..1] | [119..1] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MKVEVDSFSG AKIYPGRGTL FVRGDSKIFR FQNSKSASLF KQRKNPRRIA WTVLFRKHHK 60
61 KGITEEVAKK RS
|
| Detection Method: |  |
| Confidence: | 16.0 |
| Match: | 1s1iS |
| Description: | Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [73-155] |
1 11 21 31 41 51
| | | | | |
1 RKTVKAQRPI TGASLDLIKE RRSLKPEVRK ANREEKLKAN KEKKRAEKAA RKAEKAKSAG 60
61 VQGSKVSKQQ AKGAFQKVAA TSR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.671 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.671 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.563 | a.24.28 | Description not found. |
| View | Download | 0.502 | a.186.1 | Description not found. |
| View | Download | 0.493 | a.4.1 | Homeodomain-like |
| View | Download | 0.475 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.474 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.443 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.431 | a.71.2 | Helical domain of Sec23/24 |
