| Protein: | NUP57 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 541 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUP57.
| Description | E-value | Query Range |
Subject Range |
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2.0E-83 | [139..536] | [34..423] |
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4.0E-81 | [139..536] | [3..392] |
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3.0E-77 | [1..541] | [1..541] |
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4.0E-71 | [94..520] | [4..414] |
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2.0E-59 | [325..535] | [302..492] |
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6.0E-57 | [151..534] | [1..363] |
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4.0E-45 | [2..328] | [42..408] |
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2.0E-42 | [5..333] | [1352..1680] |
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Region A: Residues: [1-287] |
1 11 21 31 41 51
| | | | | |
1 MFGFSGSNNG FGNKPAGSTG FSFGQNNNNT NTQPSASGFG FGGSQPNSGT ATTGGFGANQ 60
61 ATNTFGSNQQ SSTGGGLFGN KPALGSLGSS STTASGTTAT GTGLFGQQTA QPQQSTIGGG 120
121 LFGNKPTTTT GGLFGNSAQN NSTTSGGLFG NKVGSTGSLM GGNSTQNTSN MNAGGLFGAK 180
181 PQNTTATTGG LFGSKPQGST TNGGLFGSGT QNNNTLGGGG LFGQSQQPQT NTAPGLGNTV 240
241 STQPSFAWSK PSTGSNLQQQ QQQQIQVPLQ QTQAIAQQQQ LSNYPQQ
|
| Detection Method: |  |
| Confidence: | 14.2 |
| Match: | 1ldvA |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [288-427] |
1 11 21 31 41 51
| | | | | |
1 IQEQVLKCKE SWDPNTTKTK LRAFVYNKVN ETEAILYTKP GHVLQEEWDQ AMEKKPSPQT 60
61 IPIQIYGFEG LNQRNQVQTE NVAQARIILN HILEKSTQLQ QKHELDTASR ILKAQSRNVE 120
121 IEKRILKLGT QLATLKNRGL
|
| Detection Method: | |
| Confidence: | 5.221849 |
| Match: | 1avc__ |
| Description: | Annexin VI |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [428-541] |
1 11 21 31 41 51
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1 PLGIAEEKMW SQFQTLLQRS EDPAGLGKTN ELWARLAILK ERAKNISSQL DSKLMVFNDD 60
61 TKNQDSMSKG TGEESNDRIN KIVEILTNQQ RGITYLNEVL EKDAAIVKKY KNKT
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.606 | 0.291 | snRNA export from nucleus | a.1.1 | Globin-like |
| View | Download | 0.917 | 0.291 | snRNA export from nucleus | a.25.1 | Ferritin-like |
| View | Download | 0.461 | 0.291 | snRNA export from nucleus | a.167.1 | Porin chaperone SurA, peptide-binding domain |
| View | Download | 0.456 | 0.291 | snRNA export from nucleus | a.1.1 | Globin-like |
| View | Download | 0.402 | 0.291 | snRNA export from nucleus | a.1.1 | Globin-like |
| View | Download | 0.394 | 0.291 | snRNA export from nucleus | a.25.1 | Ferritin-like |
| View | Download | 0.392 | 0.291 | snRNA export from nucleus | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.391 | 0.291 | snRNA export from nucleus | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.359 | 0.291 | snRNA export from nucleus | a.24.3 | Cytochromes |
| View | Download | 0.345 | 0.291 | snRNA export from nucleus | a.25.1 | Ferritin-like |
| View | Download | 0.339 | 0.291 | snRNA export from nucleus | c.23.1 | CheY-like |
| View | Download | 0.335 | 0.291 | snRNA export from nucleus | a.39.4 | Hypothetical protein MTH865 |
| View | Download | 0.332 | 0.291 | snRNA export from nucleus | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.327 | 0.291 | snRNA export from nucleus | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.324 | 0.291 | snRNA export from nucleus | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.299 | 0.291 | snRNA export from nucleus | a.1.1 | Globin-like |
| View | Download | 0.288 | 0.291 | snRNA export from nucleus | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.282 | 0.291 | snRNA export from nucleus | c.47.1 | Thioredoxin-like |
| View | Download | 0.281 | 0.291 | snRNA export from nucleus | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.280 | 0.291 | snRNA export from nucleus | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.277 | 0.291 | snRNA export from nucleus | a.74.1 | Cyclin-like |
| View | Download | 0.276 | 0.291 | snRNA export from nucleus | a.74.1 | Cyclin-like |
| View | Download | 0.274 | 0.291 | snRNA export from nucleus | a.74.1 | Cyclin-like |
| View | Download | 0.274 | 0.291 | snRNA export from nucleus | a.130.1 | Chorismate mutase II |
| View | Download | 0.273 | 0.291 | snRNA export from nucleus | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.270 | 0.291 | snRNA export from nucleus | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.268 | 0.291 | snRNA export from nucleus | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.268 | 0.291 | snRNA export from nucleus | a.39.1 | EF-hand |
| View | Download | 0.267 | 0.291 | snRNA export from nucleus | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.266 | 0.291 | snRNA export from nucleus | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.259 | 0.291 | snRNA export from nucleus | d.52.2 | GMP synthetase C-terminal dimerisation domain |
| View | Download | 0.257 | 0.291 | snRNA export from nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.255 | 0.291 | snRNA export from nucleus | a.25.1 | Ferritin-like |
| View | Download | 0.253 | 0.291 | snRNA export from nucleus | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.234 | 0.291 | snRNA export from nucleus | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.230 | 0.291 | snRNA export from nucleus | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.230 | 0.291 | snRNA export from nucleus | c.54.1 | IIA domain of mannose transporter, IIA-Man |
| View | Download | 0.223 | 0.291 | snRNA export from nucleus | e.37.1 | Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains |
| View | Download | 0.219 | 0.291 | snRNA export from nucleus | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.215 | 0.291 | snRNA export from nucleus | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.214 | 0.291 | snRNA export from nucleus | a.26.1 | 4-helical cytokines |
| View | Download | 0.213 | 0.291 | snRNA export from nucleus | a.39.1 | EF-hand |
| View | Download | 0.211 | 0.291 | snRNA export from nucleus | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.209 | 0.291 | snRNA export from nucleus | c.95.1 | Thiolase-like |
| View | Download | 0.209 | 0.291 | snRNA export from nucleus | d.6.1 | Prion-like |
| View | Download | 0.207 | 0.291 | snRNA export from nucleus | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.207 | 0.291 | snRNA export from nucleus | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.203 | 0.291 | snRNA export from nucleus | a.39.1 | EF-hand |
| View | Download | 0.203 | 0.291 | snRNA export from nucleus | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.202 | 0.291 | snRNA export from nucleus | a.74.1 | Cyclin-like |
