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View Structure Prediction Details

Protein: YGR107W
Organism: Saccharomyces cerevisiae
Length: 149 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR107W.

Description E-value Query
Range
Subject
Range
gi|172538 - gi|172538|gb|AAA35018.1| putative orf; putative
261.0 [0..9] [149..1]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSNYLVSF ACTQSFFFFA SNFIESPPAL LKKAFLPNLN RTRSRFPPIN YVLLAPLSSY  60
   61 CKWTFQRGYA CPVSFLKQAH TDALQLVFFT RCIIWAVFHY RFRVGALTKR ARPFVYNRPK 120
  121 RKNINNQEAD TKYRSTIKLT STVTLNLLY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.717 a.24.1 Apolipoprotein
View Download 0.717 a.24.1 Apolipoprotein
View Download 0.687 a.24.9 alpha-catenin/vinculin
View Download 0.641 a.24.9 alpha-catenin/vinculin
View Download 0.600 a.216.1 Description not found.
View Download 0.597 a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.588 a.24.9 alpha-catenin/vinculin
View Download 0.565 d.185.1 LuxS/MPP-like metallohydrolase
View Download 0.558 a.26.1 4-helical cytokines
View Download 0.555 a.24.14 FAT domain of focal adhesion kinase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle