YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: VOA1
Organism: Saccharomyces cerevisiae
Length: 265 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VOA1.

Description E-value Query
Range
Subject
Range
VOA1 - Endoplasmic reticulum protein that functions, together with other assembly factors, in assembly of t...
gi|207345121 - gi|207345121|gb|EDZ72045.1| YGR106Cp-like protein [Saccharomyces cerevisiae AWRI1631]
VOA1_YEAST - V0 assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VOA1 PE=1 SV=1
gi|190406874 - gi|190406874|gb|EDV10141.1| protein precursor [Saccharomyces cerevisiae RM11-1a]
0.0 [1..265] [1..265]

Back

Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFGQLYALF IFTLSCCISK TVQADSSKES SSFISFDKES NWDTISTISS TADVISSVDS  60
   61 AIAVFEFDNF SLLDNLMIDE EYPFFNRFFA NDVSLTVHDD SPLNISQSLS PIMEQFTVDE 120
  121 LPESASDLLY EYSLDDKSIV LFKFTSDAYD LKKLDEFIDS CLSFLEDKSG DNLTVVINSL 180
  181 GWAFEDEDGD DEYATEETLS HHDNNKGKEG DDDILSSIWT EGLLMCLIVS ALLLFILIVA 240
  241 LSWISNLDIT YGALEKSTNP IKKNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle