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View Structure Prediction Details

Protein: SLX9
Organism: Saccharomyces cerevisiae
Length: 210 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLX9.

Description E-value Query
Range
Subject
Range
gi|207345160 - gi|207345160|gb|EDZ72070.1| YGR081Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190406899 - gi|190406899|gb|EDV10166.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
SLX9_YEAST - Ribosome biogenesis protein SLX9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLX9 PE...
SLX9 - Protein required for pre-rRNA processing; associated with the 90S pre-ribosome and 43S small ribosom...
4.0E-88 [1..210] [1..210]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAKKRNTLR SKVSARNSQN FGPDVANNGI LDESYDIESD PRAFLHQPKE TKKEKLLNRQ  60
   61 NTFLSNLKGK STLNDGIAAN FDGISKSSIR RRKRKLREEL KPRMQDLLTS LEQEKDLRGI 120
  121 IENSSKDMNN DDDIDMDSKI RFVDTKEMNL KKIEPGSVRI KKNQPNIRNQ KGAKALAANE 180
  181 TARFNQVLTN QDFQKNPFGA LREVIKLQKQ 

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle