| Protein: | LST7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 245 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LST7.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-78 | [6..236] | [2..263] |
|
|
5.0E-78 | [6..236] | [2..263] |
|
|
5.0E-73 | [6..235] | [2..219] |
|
|
1.0E-48 | [72..229] | [255..410] |
|
|
2.0E-46 | [48..235] | [122..359] |
|
|
2.0E-38 | [1..105] | [1..105] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MHRMSSTVIS LAHFCDKHGP RIISVTQSAE KGTLGEELLV PDYPTESYCE SCLLQFPEE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.718 | d.58.17 | Metal-binding domain |
| View | Download | 0.673 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.684 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.628 | d.58.40 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| View | Download | 0.508 | d.58.17 | Metal-binding domain |
| View | Download | 0.498 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.489 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.487 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.475 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.475 | d.201.1 | SRP19 |
| View | Download | 0.474 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.464 | d.58.17 | Metal-binding domain |
| View | Download | 0.464 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.446 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.444 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.422 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.402 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.390 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.382 | d.58.17 | Metal-binding domain |
| View | Download | 0.380 | c.47.1 | Thioredoxin-like |
| View | Download | 0.342 | d.58.42 | N-utilization substance G protein NusG, N-terminal domain |
| View | Download | 0.334 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.334 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.326 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.319 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.319 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.316 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.308 | d.58.14 | Ribosomal protein S6 |
| View | Download | 0.307 | d.58.5 | GlnB-like |
| View | Download | 0.303 | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.301 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.298 | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
| View | Download | 0.291 | d.58.49 | YajQ-like |
| View | Download | 0.283 | d.74.5 | Hypothetical protein Yml108w |
| View | Download | 0.279 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.277 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.275 | d.58.5 | GlnB-like |
| View | Download | 0.264 | c.47.1 | Thioredoxin-like |
| View | Download | 0.262 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.261 | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.258 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.251 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.251 | d.94.1 | HPr-like |
| View | Download | 0.250 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.244 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.239 | d.58.12 | eEF-1beta-like |
| View | Download | 0.239 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.236 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.234 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.233 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.233 | c.47.1 | Thioredoxin-like |
| View | Download | 0.219 | c.47.1 | Thioredoxin-like |
| View | Download | 0.210 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.209 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.207 | d.95.2 | Homing endonucleases |
| View | Download | 0.203 | d.58.7 | RNA-binding domain, RBD |
|
Region A: Residues: [60-245] |
1 11 21 31 41 51
| | | | | |
1 STRSMRCFIE DVPFITTQYS SIRYQLLNSI IKRAFSEETM IYDNMPFIFF DDLRGLNLVI 60
61 GFKLYDENAR GNERRYCFIL TVDSRSHDDS MKMLSEHWNF IIGGFDKMIA YIKNIHKSEF 120
121 LGKNKTVENN LETLNNNAFI GSYLRANKSK FGRNLVSLTD DKFLFVRIHK WNSFLLHTVM 180
181 NENKLP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
