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View Structure Prediction Details

Protein: YGR039W
Organism: Saccharomyces cerevisiae
Length: 103 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR039W.

Description E-value Query
Range
Subject
Range
gi|71064028 - gi|71064028|gb|AAZ22455.1| Ygr039wp [Saccharomyces cerevisiae]
153.0 [0..1] [103..1]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFFTGLVIL SYLLGGKKDW LLIMYEASDY LEFLNRLSSM LFKFELFEHL SSTFLIFSHS  60
   61 KRAVKLLEIY RSRHISIYNV FLLRHPKYFQ SVDIALYLTR SQT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.906 a.2.17 Description not found.
View Download 0.743 c.55.4 Translational machinery components
View Download 0.742 a.29.10 Description not found.
View Download 0.734 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.734 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.707 a.29.10 Description not found.
View Download 0.696 a.59.1 PAH2 domain
View Download 0.674 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.664 f.17.1 F1F0 ATP synthase subunit C


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle