| Protein: | TIM21 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 239 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIM21.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-98 | [1..239] | [1..239] |
|
|
2.0E-67 | [10..216] | [39..235] |
|
|
1.0E-66 | [10..216] | [41..239] |
|
|
3.0E-48 | [28..203] | [9..188] |
|
|
5.0E-41 | [57..202] | [63..198] |
|
Region A: Residues: [1-239] |
1 11 21 31 41 51
| | | | | |
1 MSSSLPRSLL RLGHRKPLFP RYNTFVNSSV ITHTSLLRTR LYSNGTGATS GKKDDKTRNK 60
61 PKPLWPQVKS ASTFTFSGIL VIGAVGISAI VIYLILSELF SPSGDTQLFN RAVSMVEKNK 120
121 DIRSLLQCDD GITGKERLKA YGELITNDKW TRNRPIVSTK KLDKEGRTHH YMRFHVESKK 180
181 KIALVHLEAK ESKQNYQPDF INMYVDVPGE KRYYLIKPKL HPVSNSKGFL GIRWGPRKD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.459 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.275 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.257 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.219 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
|
Region A: Residues: [102-239] |
1 11 21 31 41 51
| | | | | |
1 PSGDTQLFNR AVSMVEKNKD IRSLLQCDDG ITGKERLKAY GELITNDKWT RNRPIVSTKK 60
61 LDKEGRTHHY MRFHVESKKK IALVHLEAKE SKQNYQPDFI NMYVDVPGEK RYYLIKPKLH 120
121 PVSNSKGFLG IRWGPRKD
|
| Detection Method: | |
| Confidence: | 50.0 |
| Match: | 2ciuA |
| Description: | No description for 2ciuA was found. |
