YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ZIP2
Organism: Saccharomyces cerevisiae
Length: 704 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZIP2.

Description E-value Query
Range
Subject
Range
ZIP2_YEAST - Protein ZIP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZIP2 PE=1 SV=1
gi|190407182 - gi|190407182|gb|EDV10449.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
ZIP2 - Meiosis-specific protein involved in normal synaptonemal complex formation and pairing between homol...
0.0 [1..704] [1..704]

Back

Predicted Domain #1
Region A:
Residues: [1-704]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIERWEVKL SKCNQNVGGY SVLSGNLKEN IKLGRRAQKY LKELRNLQLK PLKIGGYENC  60
   61 GTINGEEYFL EVIHITSGRQ KIDVAVGKTW NVTNIENDNK EELQYELFKE KLKVGKQDML 120
  121 FFSWMKSLSV QLNAPLHQKM TEHGLADDNT RLEWFNIPLL RRSQYRKKVP YPSLRQMSSV 180
  181 LEVQCSTLTE EKLNFCVGFS DKPLSEWKPQ IFEQTYNRYR LQRISPEKSF KYKSRCSKYN 240
  241 FKTSSQSWVV KVPEHDQQLN TFEKRYDELF DAQFNKLEFF KIRMKKLKKN KPIEKKNYKI 300
  301 WCLEKEDLKD LVWDPLKRIC NHSRYAIFEH VTINREAYSI KPLRLTFQKL DSGSLDLIDN 360
  361 QKKTFGSIKL AMSMPDVKKT ENQSIEESER HDETAIETQE FDENDCLSSK ADINTSLAPQ 420
  421 KRSFIDNELM SMLVTKKKIK KDKDVSDTGI SSTSYLINSG TYANSHIEIP TSNSVYNGKE 480
  481 DCSFNNYSVK HSILEEDIEN KCIAVNENKV IENQKVIQSL CKNSHLDLIE QSYFGECDFI 540
  541 INHSTCVYKI QASRFMQLRN NGSLHYDKAV NDLLTEFQRV IIIVEFSEII QDVDPDLFWK 600
  601 IKLYLLNSRV DVFFIHETTD FFIDWMKYFI ARWAFSYNDE KEKNIANADI LLDLGFNILL 660
  661 VRKIFQTYSL EEFFMAIIKE ESKAVKMLTV SQMTRLKKLL TLEW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle