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View Structure Prediction Details

Protein: HAP2
Organism: Saccharomyces cerevisiae
Length: 265 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAP2.

Description E-value Query
Range
Subject
Range
gi|7487526, gi|3... - pir||T01363 hypothetical protein At2g34720 [imported] - Arabidopsis thaliana, gi|3132473|gb|AAC16262...
204.0 [0..29] [246..12]
gi|1586551 - gi|1586551|prf||2204247A CCAAT-binding factor:SUBUNIT=B
155.0 [0..62] [241..72]
gi|7141243 - gi|7141243|gb|AAF37266.1|AF220405_1 transcription factor [Vitis riparia]
153.0 [0..111] [256..2]
HAP2_KLULA - Transcriptional activator HAP2 OS=Kluyveromyces lactis GN=HAP2 PE=3 SV=1
HAP2_KLULA - Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NB...
147.0 [0..87] [252..121]
gi|115449011, gi... - gi|115449011|ref|NP_001048285.1| Os02g0776400 [Oryza sativa (japonica cultivar-group)], gi|113537816...
146.0 [0..39] [241..140]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADETDAKF HPLETDLQSD TAAATSTAAA SRSPSLQEKP IEMPLDMGKA PSPRGEDQRV  60
   61 TNEEDLFLFN RLRASQNRVM DSLEPQQQSQ YTSSSVSTME PSADFTSFSA VTTLPPPPHQ 120
  121 QQQQQQQQQQ QQQLVVQAQY TQNQPNLQSD VL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.272 N/A N/A d.58.26 GHMP Kinase, C-terminal domain
View Download 0.272 N/A N/A d.58.26 GHMP Kinase, C-terminal domain
View Download 0.259 N/A N/A d.108.1 Acyl-CoA N-acyltransferases (Nat)
View Download 0.235 N/A N/A c.44.1 Phosphotyrosine protein phosphatases I
View Download 0.234 N/A N/A a.131.1 Peridinin-chlorophyll protein
View Download 0.234 N/A N/A a.131.1 Peridinin-chlorophyll protein
View Download 0.210 N/A N/A d.198.1 Type III secretory system chaperone
View Download 0.210 N/A N/A d.198.1 Type III secretory system chaperone

Predicted Domain #2
Region A:
Residues: [153-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTAIAEQPFY VNAKQYYRIL KRRYARAKLE EKLRISRERK PYLHESRHKH AMRRPRGEGG  60
   61 RFLTAAEIKA MKSKKSGASD DPDDSHEDKK ITTKIIQEQP HATSTAAAAD KKT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.886057
Match: PF02045.6
Description: No description for PF02045.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.530 N/A N/A a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.297 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.251 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.240 N/A N/A a.24.22 Description not found.
View Download 0.240 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.200 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle