YRC Public Data Repository - Protein Structure Prediction

Protein:	YGL218W
Organism:	Saccharomyces cerevisiae
Length:	216 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGL218W.

Description	E-value	Query Range	Subject Range
gi\|50302271, gi\|... - gi\|50302271\|ref\|XP_451069.1\| unnamed protein product [Kluyveromyces lactis], gi\|49640200\|emb\|CAH0265...	57.0	[0..16]	[78..1]

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Predicted Domain #1

Region A:
Residues: [1-216]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLVLSPRLV NQFCDVLKIK EGRTSLNTTC MDSFSLLSMV LWRIFTEQSN LKSKSTSLKD  60
   61 IPIPGFFTKI FVMASSSMEL NVIVIGIVND PLLMSWGMVK LGVSCSLINK RFDSMTVCIR 120
  121 NIASLHEILQ IPLARDLGCV IMSRSRISSC GIVGKSTFCT LIPLFKISNF FLDGEFKAVD 180
  181 NFSRIRSLKE LSPNTASLNL NDMTMLKFLA VVFFLL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [90-216]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPLLMSWGMV KLGVSCSLIN KRFDSMTVCI RNIASLHEIL QIPLARDLGC VIMSRSRISS  60
   61 CGIVGKSTFC TLIPLFKISN FFLDGEFKAV DNFSRIRSLK ELSPNTASLN LNDMTMLKFL 120
  121 AVVFFLL