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View Structure Prediction Details

Protein: RPS26A
Organism: Saccharomyces cerevisiae
Length: 119 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS26A.

Description E-value Query
Range
Subject
Range
gi|109478147 - gi|109478147|ref|XP_216698.3| PREDICTED: similar to 40S ribosomal protein S26 [Rattus norvegicus]
188.0 [0..4] [115..102]
RS26_OCTVU - 40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1
181.0 [0..1] [116..1]
gi|38566094, gi|... - gi|41053335|ref|NP_956319.1| ribosomal protein S26 [Danio rerio], gi|38566094|gb|AAH62287.1| Ribosom...
180.0 [0..1] [111..1]
gi|114621444, gi... - gi|55631132|ref|XP_519920.1| PREDICTED: similar to 40S ribosomal protein S26-2 isoform 2 [Pan troglo...
180.0 [0..1] [111..1]
gi|15294065 - gi|15294065|gb|AAK95209.1|AF402835_1 40S ribosomal protein S26-2 [Ictalurus punctatus]
179.0 [0..1] [103..1]
gi|61371924 - gi|61371924|gb|AAX43757.1| ribosomal protein S26 [synthetic construct]
179.0 [0..1] [101..1]
gi|113420393, gi... - gi|113420393|ref|XP_001126697.1| PREDICTED: similar to 40S ribosomal protein S26 [Homo sapiens], gi|...
179.0 [0..1] [101..1]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKRASNGR NKKGRGHVKP VRCVNCSKSI PKDKAIKRMA IRNIVEAAAV RDLSEASVYP  60
   61 EYALPKTYNK LHYCVSCAIH ARIVRVRSRE DRKNRAPPQR PRFNRENKVS PADAAKKAL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 70.657577
Match: PF01283.10
Description: No description for PF01283.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle