| Protein: | TPN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 579 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPN1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..579] | [1..579] |
|
|
0.0 | [3..579] | [7..561] |
|
|
0.0 | [15..579] | [27..528] |
|
|
1.0E-97 | [12..532] | [38..581] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MNRDNMDTTK RKEDHTKHTT DVIEFYEEGT AASSLNIATE KANSSPSILR RIINRAAWLS 60
61 KKVDAMGV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.409 | a.4.1 | Homeodomain-like |
| View | Download | 0.512 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.630 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.481 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.438 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.387 | a.4.1 | Homeodomain-like |
| View | Download | 0.386 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.370 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.359 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.359 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.351 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.312 | a.4.1 | Homeodomain-like |
| View | Download | 0.305 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.303 | a.118.8 | TPR-like |
| View | Download | 0.303 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.289 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.285 | a.64.1 | Saposin |
| View | Download | 0.279 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.277 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.277 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.259 | a.4.1 | Homeodomain-like |
| View | Download | 0.257 | a.4.1 | Homeodomain-like |
| View | Download | 0.257 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.254 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.250 | a.4.1 | Homeodomain-like |
| View | Download | 0.248 | a.4.1 | Homeodomain-like |
| View | Download | 0.248 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.246 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.240 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.235 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.222 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.219 | a.65.1 | Annexin |
| View | Download | 0.217 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.203 | a.74.1 | Cyclin-like |
| View | Download | 0.202 | a.85.1 | Hemocyanin, N-terminal domain |
|
Region A: Residues: [69-579] |
1 11 21 31 41 51
| | | | | |
1 ESTGIQRISP YERGTSKKQF LHVAGLWLSA TGGLSSMSSF LLGPLLFGLS FRESVASSLI 60
61 SVTIGCLIAA YCSIMGPQSG CRQMVTARYL FGWWFVKLVA LASIIGVMGW SVVNSVVGGE 120
121 MLAAISNDKV PLWVGIVIVT VCSFLVAIFG IKQVIKVETY LSVPVLTAFL LLYISSSDKY 180
181 SFVNAYVSKG NLDSSTRKGN WMSFFSLCYS ITATWGSITA DYYILFPEDT PYIQIFCLTF 240
241 FGTFLPTCFV GILGLLLASV AMSYKPWSVE YDSHGMGGLL WAGFQRWNGF GKFCVVVLVF 300
301 SLVSNNIINT YSAAFSIQLS SVFCAKIPRW FWSIVCTIIC LVCALIGRNH FSTILGNFLP 360
361 MIGYWISMYF ILLFEENLVF RRFFLHLYTK EFPTVTGEIN GPELVGSSKE VEKDAVTNIH 420
421 LLKRKHKVTK HRYNWDKWED YEVLTHGYAA TFAFIVGVAG VVVGMAQAYW IGPIAAKFGE 480
481 YGGDVAMWLS MAFSGVVYPP CRYLELRKFG R
|
| Detection Method: | |
| Confidence: | 4.136677 |
| Match: | PF02133 |
| Description: | Permease for cytosine/purines, uracil, thiamine, allantoin |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [502-579] |
1 11 21 31 41 51
| | | | | |
1 NWDKWEDYEV LTHGYAATFA FIVGVAGVVV GMAQAYWIGP IAAKFGEYGG DVAMWLSMAF 60
61 SGVVYPPCRY LELRKFGR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
