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View Structure Prediction Details

Protein: YGL177W
Organism: Saccharomyces cerevisiae
Length: 115 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YGL177W.

Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIRIFSKEG LRERGASGKN EQKKKKKEKI RRSMKNLCRF VESYKDFTLY GYRFHSKIKH  60
   61 KFCVLSSSFP VLFFCHPLSP LKSNFIDRFT LDSHASQATW TLYMVVIVLF LSYRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.674 f.14.1 Voltage-gated potassium channels
View Download 0.674 f.14.1 Voltage-gated potassium channels
View Download 0.626 a.24.9 alpha-catenin/vinculin
View Download 0.619 d.93.1 SH2 domain
View Download 0.619 d.93.1 SH2 domain
View Download 0.619 f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.609 d.204.1 Ribosome binding protein Y (YfiA homologue)
View Download 0.569 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.555 a.24.9 alpha-catenin/vinculin
View Download 0.526 a.24.16 Nucleotidyltransferase substrate binding subunit/domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle