YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YGL176C
Organism: Saccharomyces cerevisiae
Length: 554 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGL176C.

Description E-value Query
Range
Subject
Range
YGL176C - Putative protein of unknown function; deletion mutant is viable and has no detectable phenotype
YGS6_YEAST - Uncharacterized protein YGL176C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL176C ...
0.0 [1..554] [1..554]

Back

Predicted Domain #1
Region A:
Residues: [1-554]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPNLPGFYY DRERRRYFRI SENQSISTTG TTNQYRKDNI KRQCVEENYD KKFSMIKKKR  60
   61 QQTLQKYKLS LLNPLERAFR PLSYEKYMIG LNMQYASHSL TEGHHSHSSA NVKSLNFPHR 120
  121 IQIGVLANCI LLVTQEGCFH SKLVFATNKG YVAGFSSLDN FSEENFFTGF SMAELNPMLK 180
  181 YKSEPTDVFK TMKLERTVAI KEGPSHYFYH NVNTRSNVHT FAIFLQDFSS LKLLKIRQVK 240
  241 LKENCQVHDS LVVGDTLIIT VNYRCHFYDL IPETFPNPYI FSPAKSSRKH KSRSDITSLS 300
  301 FCLQEDALSP LKKTNTGVFY LGYRNGDSMA IVFTNITNMT LQYSKTNGMT SESRNQPIRN 360
  361 SLKSVVSIKA LNNKGLILIS GMADKENVQQ LVIADTFLED ILTEIPVVSF KTKFLNVTKD 420
  421 TEILEISDDG RYFIYGSTSA RDGKGDFEVF CTTLSGNLDY EKSEGGNITL YPIGGMKNYC 480
  481 RLENFQFESI HLHSAFIPPR YVNPFDAVEP LGEESSTSPY DIPEEALSQK ICILIRREDD 540
  541 PYNGANIFIT SALT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle