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View Structure Prediction Details

Protein: SAE2
Organism: Saccharomyces cerevisiae
Length: 345 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAE2.

Description E-value Query
Range
Subject
Range
SAE2 - Endonuclease that processes hairpin DNA structures with the MRX complex; involved in meiotic and mit...
COM1_YEAST - DNA endonuclease SAE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SAE2 PE=1 SV=1
0.0 [1..345] [1..345]

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Predicted Domain #1
Region A:
Residues: [1-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTGEENVYL KSSLSILKEL SLDELLNVQY DVTTLIAKRV QALQNRNKCV LEEPNSKLAE  60
   61 ILCHEKNAPQ QSSQTSAGPG EQDSEDFILT QFDEDIKKES AEVHYRNENK HTVQLPLVTM 120
  121 PPNRHKRKIS EFSSPLNGLN NLSDLEDCSD TVIHEKDNDK ENKTRKLLGI ELENPESTSP 180
  181 NLYKNVKDNF LFDFNTNPLT KRAWILEDFR PNEDIAPVKR GRRKLERFYA QVGKPEDSKH 240
  241 RSLSVVIESQ NSDYEFAFDN LRNRSKSPPG FGRLDFPSTQ EGNEDKKKSQ EIIRRKTKYR 300
  301 FLMASNNKIP PYEREYVFKR EQLNQIVDDG CFFWSDKLLQ IYARC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLNNLSDLED CSDTVIHEKD NDKENKTRKL LGIELENPES TSPNLYKNVK DNFLFDFNTN  60
   61 PLTKRAWILE DFRPNEDIAP VKRGRRKLER FYAQVGKPED SKHRSLSVVI ESQNSDYEFA 120
  121 FDNLRNRSKS PPGFGRLDFP STQEGNEDKK KSQEIIRRKT KYRFLMASNN KIPPYEREYV 180
  181 FKREQLNQIV DDGCFFWSDK LLQIYARC

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 90.677781
Match: PF08573.1
Description: No description for PF08573.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle