| Protein: | CWC23 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 347 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CWC23.
| Description | E-value | Query Range |
Subject Range |
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2.0E-47 | [25..274] | [43..299] |
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1.0E-44 | [38..275] | [31..276] |
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2.0E-44 | [29..272] | [45..304] |
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2.0E-43 | [71..272] | [1..203] |
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2.0E-42 | [34..282] | [49..296] |
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5.0E-42 | [73..272] | [108..312] |
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2.0E-40 | [32..266] | [61..294] |
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3.0E-40 | [34..266] | [49..280] |
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Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MNIYTHTHIY ISHIYIYICI YICKPHYFVF SFLCFPCILS RKTLEDESKI KKQVHRRTTS 60
61 LATTM
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.456 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.453 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.468 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.459 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.425 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.407 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.396 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.389 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.378 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.350 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.339 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.338 | a.3.1 | Cytochrome c |
| View | Download | 0.337 | a.159.2 | FF domain |
| View | Download | 0.333 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.332 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.327 | a.180.1 | N-terminal, cytoplasmic domain of anti-sigmaE factor RseA |
| View | Download | 0.317 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.311 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.298 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.295 | a.64.1 | Saposin |
| View | Download | 0.291 | a.3.1 | Cytochrome c |
| View | Download | 0.290 | a.4.1 | Homeodomain-like |
| View | Download | 0.279 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.278 | d.15.1 | Ubiquitin-like |
| View | Download | 0.275 | a.112.1 | Description not found. |
| View | Download | 0.269 | a.64.1 | Saposin |
| View | Download | 0.266 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.265 | a.2.3 | Chaperone J-domain |
| View | Download | 0.265 | a.64.1 | Saposin |
| View | Download | 0.263 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.261 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.259 | a.7.7 | BAG domain |
| View | Download | 0.257 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.255 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.254 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.249 | a.4.1 | Homeodomain-like |
| View | Download | 0.249 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.249 | a.2.3 | Chaperone J-domain |
| View | Download | 0.247 | a.64.1 | Saposin |
| View | Download | 0.243 | a.30.1 | ROP protein |
| View | Download | 0.242 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.240 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.235 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.234 | a.105.1 | FIS-like |
| View | Download | 0.231 | a.64.1 | Saposin |
| View | Download | 0.230 | a.2.3 | Chaperone J-domain |
| View | Download | 0.226 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.226 | a.28.1 | ACP-like |
| View | Download | 0.221 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.221 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.218 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.205 | d.15.1 | Ubiquitin-like |
| View | Download | 0.204 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.203 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.202 | a.2.3 | Chaperone J-domain |
| View | Download | 0.202 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.202 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.200 | a.3.1 | Cytochrome c |
|
Region A: Residues: [66-183] |
1 11 21 31 41 51
| | | | | |
1 PGHELEDVIN QRLNLYDVLE LPTPLDVHTI YDDLPQIKRK YRTLALKYHP DKHPDNPSII 60
61 HKFHLLSTAT NILTNADVRP HYDRWLIEFL RKTNDIERNK LIQKLEESES STIPTTTP
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| Detection Method: | |
| Confidence: | 64.211549 |
| Match: | 1xbl__ |
| Description: | DnaJ chaperone, N-terminal (J) domain |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [184-347] |
1 11 21 31 41 51
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1 HPDLLQIQRH GELLRKLKHF NLPYGDWKHL NTQDQENASQ HPYYDCSTLR IVLDNFLQSN 60
61 NKSNCLSHLR NQVFITLSAN EIYDIYFSER NNYSKDDSII IYTVFDTPIT AQHVFRNWSS 120
121 GNLIPTVKDI SPLIPLHYYS DFNLETELND DIARLVSNEP ILLD
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
