| Protein: | SCS3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 380 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCS3.
| Description | E-value | Query Range |
Subject Range |
|
|
715.0 | [0..1] | [380..1] |
|
|
231.0 | [0..6] | [370..11] |
|
|
202.0 | [0..11] | [370..12] |
|
|
166.0 | [0..12] | [370..7] |
|
|
143.0 | [0..17] | [120..33] |
|
|
83.0 | [0..36] | [250..61] |
|
|
79.0 | [0..11] | [130..24] |
|
|
71.0 | [0..13] | [120..43] |
|
|
69.0 | [0..36] | [120..112] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MSSKWFNAIH LLVCPLTVLV GYLMNAYGYG AALQATLNKD GLVNAMLVKK GWFWTSLVGW 60
61 WCIIRYRAVP GATGRDRRHI VQSFKRYAIL TVWWYVFTQG IWFGVGPIMD LVFVYTGGHC 120
121 HYDVFDD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.817 | N/A | N/A | a.204.1 | Description not found. |
| View | Download | 0.775 | N/A | N/A | a.216.1 | Description not found. |
| View | Download | 0.756 | N/A | N/A | a.216.1 | Description not found. |
| View | Download | 0.746 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.746 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.734 | N/A | N/A | a.29.9 | Description not found. |
| View | Download | 0.630 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.622 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.538 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.500 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
|
Region A: Residues: [128-230] |
1 11 21 31 41 51
| | | | | |
1 AGHVNEDFQG SVTRTNRALA LIHNVLTLHG HHQEHRQQQL WDRSIGSIQG ALQATQPKTP 60
61 KNVTASAAAA INTFIHDQMH RWQGPLTTSA QCRRFGGHWA GGH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [231-380] |
1 11 21 31 41 51
| | | | | |
1 DPSGHVFLAT LMCMFLLGEL RVFGRRALAH LYAQKWQLVR LVTRLFDTGP LWTWRRCGGG 60
61 SMTCGARLWR AIVEPPVTCA AALLRLTRCI ACDHPVIILL TLLVTWLWQL LLTAVASRFH 120
121 TVREHMSGLL AAYIVTGLVY ARDAAALRPV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.719 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.677 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.624 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.606 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.599 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.372 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.326 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.248 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.248 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.217 | N/A | N/A | a.7.8 | GAT domain |
