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View Structure Prediction Details

Protein: YGL109W
Organism: Saccharomyces cerevisiae
Length: 107 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YGL109W.

Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQNPLADI QVYKRYKAKR RMEGQKKNSC TIAYIDSLQY YCRRSLSHKS CFPFPSQHAF  60
   61 SRPLPLSESY ETWHALELAF CLTRPYCTFH SSLEISSQQL TLRPPLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.739 d.68.1 Translation initiation factor IF3, C-terminal domain
View Download 0.519 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.478 d.52.8 Description not found.
View Download 0.393 d.73.1 RuBisCO, small subunit
View Download 0.392 a.24.22 Description not found.
View Download 0.383 a.48.3 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
View Download 0.310 a.29.2 Bromodomain
View Download 0.297 a.2.5 Prefoldin
View Download 0.279 a.118.8 TPR-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle