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View Structure Prediction Details

Protein: YGL102C
Organism: Saccharomyces cerevisiae
Length: 142 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGL102C.

Description E-value Query
Range
Subject
Range
gi|49644525, gi|... - gi|50310735|ref|XP_455389.1| unnamed protein product [Kluyveromyces lactis], gi|49644525|emb|CAG9809...
gi|24943208 - gi|24943208|gb|AAN65372.1| YGL102C-like protein [Kluyveromyces lactis]
188.0 [0..3] [139..10]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSDQFNNT TSSSDFFFSQ LGDESSFDDN WNIWNSTLTQ DLTVTGCQSV NNWSSFLRSR  60
   61 FQVLVSLVFW DQCPQFVQVQ DWLPEMSLLL VEVSHTNLTE ITWMVFIHVN SVVMLTTGHT 120
  121 STTGVLSVLT DTTFTGCTKK IL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.696 a.118.9 ENTH/VHS domain
View Download 0.608 a.75.1 Ribosomal protein S7
View Download 0.602 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.533 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.515 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.480 d.58.46 eEF1-gamma domain
View Download 0.422 a.1.1 Globin-like
View Download 0.411 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.401 a.118.9 ENTH/VHS domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle