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View Structure Prediction Details

Protein: YGL079W
Organism: Saccharomyces cerevisiae
Length: 218 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGL079W.

Description E-value Query
Range
Subject
Range
YGL079W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
KXD1_YEASA - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAS1 - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAS8 - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAS6 - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAST - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEASO - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEASL - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEASV - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
KXD1_YEAS7 - Biogenesis of lysosome-related organelles complex 1 subunit KXD1 OS=Saccharomyces cerevisiae (strain...
0.0 [1..218] [1..218]
CE09471 - status:Partially_confirmed UniProt:O02068 protein_id:AAB52924.1
0.007 [54..218] [171..319]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTGISEEND DEETFSAVHS STPSINSQSY AIPITEEMSS SFHDSISTTS NSSGSFDSDG  60
   61 SNVSDVVEQN EMDNESNVDE DLFLDNDIPQ SSNLLPTDAQ DPGPIFDVSR YIFDSLKQSI 120
  121 DSADFSEALS LQTKTSAVIN SKSLELKQYI DEMKSRLTQL QEKFENGEAT SKKIKRDLET 180
  181 SRKNIDYLNA ALRVDFPIEF NQAREKILER RLNEDHDC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPGPIFDVSR YIFDSLKQSI DSADFSEALS LQTKTSAVIN SKSLELKQYI DEMKSRLTQL  60
   61 QEKFENGEAT SKKIKRDLET SRKNIDYLNA ALRVDFPIEF NQAREKILER RLNEDHDC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle