| Protein: | RPL7A |
| Organism: | Saccharomyces cerevisiae |
| Length: | 244 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL7A.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-88 | [3..244] | [9..248] |
|
|
6.0E-88 | [3..244] | [23..262] |
|
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8.0E-87 | [3..244] | [31..270] |
|
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2.0E-86 | [3..244] | [21..260] |
|
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1.0E-82 | [3..242] | [21..258] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MAAEKILTPE SQLKKSKAQQ KTAEQVAAER AARKAANKEK RAIILERNAA YQKEYETAER 60
61 NIIQAKRDAK AAGSYYV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.798 | a.47.2 | t-snare proteins |
| View | Download | 0.768 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.869 | a.7.8 | GAT domain |
| View | Download | 0.920 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.920 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.869 | a.7.8 | GAT domain |
| View | Download | 0.841 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.841 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.798 | a.47.2 | t-snare proteins |
| View | Download | 0.768 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.708 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.706 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.666 | a.2.7 | tRNA-binding arm |
| View | Download | 0.664 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.634 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.628 | a.7.1 | Spectrin repeat |
| View | Download | 0.615 | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.612 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.580 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.567 | a.47.2 | t-snare proteins |
| View | Download | 0.548 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.513 | a.24.3 | Cytochromes |
| View | Download | 0.507 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.506 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.495 | a.126.1 | Serum albumin-like |
| View | Download | 0.466 | a.7.1 | Spectrin repeat |
| View | Download | 0.443 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.437 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.432 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.429 | a.2.7 | tRNA-binding arm |
| View | Download | 0.427 | a.24.3 | Cytochromes |
| View | Download | 0.425 | a.64.1 | Saposin |
| View | Download | 0.416 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.410 | a.24.3 | Cytochromes |
| View | Download | 0.383 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.380 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.376 | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
| View | Download | 0.370 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.364 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.351 | a.24.4 | Hemerythrin |
| View | Download | 0.349 | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
| View | Download | 0.338 | a.46.1 | Methionine synthase domain |
| View | Download | 0.317 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.293 | a.2.3 | Chaperone J-domain |
| View | Download | 0.293 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.289 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.281 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.272 | a.30.1 | ROP protein |
| View | Download | 0.271 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.268 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.265 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.256 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.251 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.249 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.248 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.244 | a.112.1 | Description not found. |
| View | Download | 0.244 | a.2.3 | Chaperone J-domain |
| View | Download | 0.243 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.242 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.239 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.230 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.229 | a.74.1 | Cyclin-like |
| View | Download | 0.228 | a.24.1 | Apolipoprotein |
| View | Download | 0.218 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.217 | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.213 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.212 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.206 | a.118.14 | FliG |
| View | Download | 0.201 | a.4.1 | Homeodomain-like |
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Region A: Residues: [78-244] |
1 11 21 31 41 51
| | | | | |
1 EAQHKLVFVV RIKGINKIPP KPRKVLQLLR LTRINSGTFV KVTKATLELL KLIEPYVAYG 60
61 YPSYSTIRQL VYKRGFGKIN KQRVPLSDNA IIEANLGKYG ILSIDDLIHE IITVGPHFKQ 120
121 ANNFLWPFKL SNPSGGWGVP RKFKHFIQGG SFGNREEFIN KLVKSMN
|
| Detection Method: | |
| Confidence: | 939.502279 |
| Match: | 1k5yF_ |
| Description: | No description for 1k5yF_ was found. |
