| Protein: | MRH4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 561 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRH4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [6..513] | [109..609] |
|
|
0.0 | [6..513] | [66..566] |
|
|
0.0 | [6..513] | [66..568] |
|
|
0.0 | [6..513] | [109..609] |
|
|
0.0 | [6..513] | [66..568] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MSLFFKPVIS PQWSFPVLLK IGVRSYAGGP RTKHKGNSPL ASVPTGSSNK NRKQKAKGKK 60
61 GNKKNDPDQA FNFGEYGGLK KDVEMNMDST NKLIQKISNF DQLLI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [106-342] |
1 11 21 31 41 51
| | | | | |
1 LPPVRDAVKE IISKESLKLQ DSRKKTSENI IPSPIQTVAI KRISKNLMDP KLQIHAIAAE 60
61 TGSGKTMAYL IPLIDYLKRQ ELETPELWET LRKNVLIRSI ILVPTHELVD QVYETVSKTK 120
121 TLLGLNSFKW DKATSYRDLL ENIKNRIDIL VTTPGKLLNL FSIRMITRPD KVLSKVGFVV 180
181 LDEADTLLDR SWLEETHSAI KRIPNINHLI FCSATIPQEF NKTMQRLFPT VVPIMTP
|
| Detection Method: | |
| Confidence: | 236.228787 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [343-507] |
1 11 21 31 41 51
| | | | | |
1 RLHKLPFALD FKVINSALSP FKGSKIKALA QTLYAISNDD TEPGFEKRCI IFVNEKKNVP 60
61 EIVNLLNKKF GHNAIGLTGE DTFEERSEKI MPFLSPPRPL SEVVAQSTSP PTSLKKFEIP 120
121 DSNIVIGKLK NTNSNGTAPS NKSLHVLVTT DLMARGLNFK GVRNV
|
| Detection Method: | |
| Confidence: | 236.228787 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [508-561] |
1 11 21 31 41 51
| | | | | |
1 VLYDVPKTSI DLIHRVGRTA RMKQGGRVFM LTDSKTKSWA KALPKIIKKH QRLS
|
| Detection Method: | |
| Confidence: | 11.54 |
| Match: | 1fuuA |
| Description: | Initiation factor 4a |
Matching Structure (courtesy of the PDB): |
|
