YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PRM8
Organism: Saccharomyces cerevisiae
Length: 237 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRM8.

Description E-value Query
Range
Subject
Range
PRM8_YEAST - Pheromone-regulated membrane protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=P...
PRM8 - Pheromone-regulated protein with 2 predicted transmembrane segments and an FF sequence, a motif invo...
2.0E-93 [1..237] [1..237]

Back

Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTPSENTNA KSDSLDEPGA YLIEENVALP KDIFHSYLSY WIYEAAHCTP VMLLSLVIGV  60
   61 LISIIILFHD NENCVGVSVG FLLIFSGILV IVLILRFGPQ ISDEDFKCKL LMEIITRKPT 120
  121 VKGKEWRTIT YKMNQYLFDN DLWNTPYYFY RDEDCHRYFL SLIKGRTFKK QKESSASNVK 180
  181 DAQSNDETAG TPNEAAESSS FSAGPNFIKL LTKAAEIEQQ FQKEYWRQEY PGVDEFF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 58.408935
Match: PF00674
Description: DUP family

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle