| Protein: | PIB2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 635 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIB2.
| Description | E-value | Query Range |
Subject Range |
|
|
359.0 | [0..1] | [635..1] |
|
|
275.0 | [0..11] | [598..177] |
|
|
262.0 | [0..11] | [598..279] |
|
|
215.0 | [0..5] | [598..270] |
|
Region A: Residues: [1-364] |
1 11 21 31 41 51
| | | | | |
1 MTALHSVSKT PAIKEEEEDG DERDGRGVPL GPRNHDYRGR KGDEESGADT VTSPITFEKK 60
61 KIAPRASTHS EQSILSSISL KSMVNQHRQQ QLQQESSTGA GTGFVDRKQQ IQSPAMVSIL 120
121 RKNSAEENVR SSHSSKLGEG QIDGRKASAS KEIGKTLPFT DDQRSNPELD PTNSVVDVSR 180
181 GKNTKSKTVF NELEDDADDD DEVRQKNLTT QALRKLSSFK MNASSNLRLS KENKAKESSS 240
241 SSTSSVSSSS TSKVENIVDK LTTTNSSSMS QLRFGNTNVI IDSVNHAAKP PHQQMLRKPS 300
301 LEFLPQPASS TNLNFNSNKH KSNVRQISNP KKPLYIPAVL RKVSETNITN DDLLNATLSS 360
361 YYKK
|
| Detection Method: |  |
| Confidence: | 13.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [365-446] |
1 11 21 31 41 51
| | | | | |
1 ASNLEHGFNP SKSQSASVQN ANNLRIISSQ SSVQSNTSSI LESYKNKISS YLFPNSIPNS 60
61 DRINLIPTIS NRNSARVNPP TK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [447-575] |
1 11 21 31 41 51
| | | | | |
1 DHWIPDSKRN SCRYCHKPFT LWERKHHCRH CGDIFCQDHL RHWLYLDSQA NFIMINELNN 60
61 GGINGGGTLC KICDDCLVEY ENLSTTNHNA NTNEDNINVE EGEDDDNDNR KKLRNYYKNR 120
121 QMNALFRPK
|
| Detection Method: | |
| Confidence: | 93.751666 |
| Match: | 1vfyA |
| Description: | vps27p protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [576-635] |
1 11 21 31 41 51
| | | | | |
1 KGGSSQEHAT VDRDTTTPIQ VKSNDEEADN ENTGGEQEEG NDVLGSVIGS VPANWNWSSF 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
