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View Structure Prediction Details

Protein: GET1
Organism: Saccharomyces cerevisiae
Length: 235 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GET1.

Description E-value Query
Range
Subject
Range
GET1_YEAS6 - Golgi to ER traffic protein 1 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=GET1 PE=3 SV=1
GET1 - Subunit of the GET complex; involved in insertion of proteins into the ER membrane; required for the...
GET1_YEAS7 - Golgi to ER traffic protein 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=GET1 PE=3 SV=1
GET1_YEAS1 - Golgi to ER traffic protein 1 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=GET1 PE=3 SV=1
GET1_YEAST - Golgi to ER traffic protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GET1 PE=1 ...
0.0 [1..235] [1..235]
SPBC543.10 - GET complex subunit
GET1_SCHPO - Protein get1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=get1 PE=1 SV=1
0.004 [12..198] [9..170]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHWAAAVAIF FIVVTKFLQY TNKYHEKWIS KFAPGNELSK KYLAKVKERH ELKEFNNSIS  60
   61 AQDNYAKWTK NNRKLDSLDK EINNLKDEIQ SENKAFQAHL HKLRLLALTV PFFVFKIMYG 120
  121 KTPVYKLSSS TSTLFPTFVS GVWSQGWLYV LLHPLRTISQ KWHIMEGKFG ASKFDDMALQ 180
  181 SVSLGIWVWA LMNVINGVEF IVKQLFLTPK MEAPASVETQ EEKALDAVDD AIILD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle