| Protein: | RET2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 546 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RET2.
| Description | E-value | Query Range |
Subject Range |
|
|
482.0 | [0..1] | [545..1] |
|
|
481.0 | [0..1] | [545..1] |
|
|
481.0 | [0..1] | [545..1] |
|
|
481.0 | [0..1] | [545..1] |
|
|
480.0 | [0..1] | [545..1] |
|
|
479.0 | [0..2] | [545..43] |
|
|
478.0 | [0..1] | [545..1] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MVVLAASITT RQGKPLLSRQ FKDLSKDRVL ELLSNFQNLV SEISSDHTFV EDKHVRYVYR 60
61 PFDNYYIILI TNRQSNIIKD LATLN
|
| Detection Method: |  |
| Confidence: | 101.274545 |
| Match: | 1gw5S |
| Description: | Sigma2 adaptin (clathrin coat assembly protein AP17) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [86-177] |
1 11 21 31 41 51
| | | | | |
1 LFSQTINSYL SSFQDQEIFH NAFEILSSFD EIVSMGGYKE NLSFTQVQTY LSMESHEERI 60
61 QEIIERNKEI EATEERKRRA KEIARKEHER KH
|
| Detection Method: | |
| Confidence: | 101.274545 |
| Match: | 1gw5S |
| Description: | Sigma2 adaptin (clathrin coat assembly protein AP17) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [178-233] |
1 11 21 31 41 51
| | | | | |
1 GFMSSNGDYD GANRFMGSKD PNVTNAINSY YSHASPAAQQ SYLQSSHAAA AEVAPV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [234-546] |
1 11 21 31 41 51
| | | | | |
1 ASPMATSQRA GHSATGGMKL GGGAGRRAGA APRPSAISSA SSGTPPPPEE DVPENNGILI 60
61 SIKEVINAEF SRDGTIHSSE LKGVLELRIN DHDLSHSNLK LADSIDVRDK SFQFKTHPNI 120
121 DKQSFLSTKL ISLRDKSKAF PANDQSLGVL RWRKVAPAED DSLIPLTLTT WVSPSESQQG 180
181 FDVIIEYESV LETELADVIF TIPVFPQEPV DINTESSTCS DAEVVNMDQE MGTSIKISKI 240
241 AANDAGALAF TIEAPYEDAL YPMTVSFQES TRDKLAKSFT GMAIQSVVMA NDHDQELPYD 300
301 VITSLKSDEY LVQ
|
| Detection Method: | |
| Confidence: | 77.522879 |
| Match: | 1gw5M |
| Description: | Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor; Mu2 adaptin (clathrin coat assembly protein AP50) |
| Matching Structure (courtesy of the PDB): |
|
