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View Structure Prediction Details

Protein: YMR31
Organism: Saccharomyces cerevisiae
Length: 123 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR31.

Description E-value Query
Range
Subject
Range
gi|49524274, gi|... - gi|50285087|ref|XP_444972.1| hypothetical protein CAGL0A04697g [Candida glabrata CBS138], gi|4952427...
gi|49524274 - gi|49524274|emb|CAG57865.1| unnamed protein product [Candida glabrata]
141.0 [0..1] [123..1]
gi|44984788 - gi|44984788|gb|AAS53631.1| AFR260Cp [Ashbya gossypii ATCC 10895]
gi|44984788, gi|... - gi|45198778|ref|NP_985807.1| AFR260Cp [Ashbya gossypii ATCC 10895], gi|44984788|gb|AAS53631.1| AFR26...
109.0 [0..1] [123..1]
gi|49642710 - gi|49642710|emb|CAH00672.1| KLLA0D11550p [Kluyveromyces lactis]
gi|49642710, gi|... - gi|50307195|ref|XP_453576.1| unnamed protein product [Kluyveromyces lactis], gi|49642710|emb|CAH0067...
99.0 [0..1] [121..1]
gi|145015475, gi... - gi|39963404|ref|XP_364898.1| hypothetical protein MGG_09743 [Magnaporthe grisea 70-15], gb|EAA49752....
51.0 [0..9] [122..12]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIATPIRLAK SAYEPMIKFV GTRHPLVKHA TEVVVHPCAT NGMLPGSKEC IPVSKFMENY  60
   61 KPFRVVPIKH SANAGLSSSK TSVFVNRPLQ KDELASIFEL PARFRYKPIN EHELESINSG 120
  121 GAW

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.620 d.65.1 Hedgehog/DD-pepidase
View Download 0.420 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.420 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.419 c.23.1 CheY-like
View Download 0.410 a.60.16 Description not found.
View Download 0.406 b.60.1 Lipocalins
View Download 0.406 b.60.1 Lipocalins
View Download 0.395 b.60.1 Lipocalins
View Download 0.335 c.23.1 CheY-like
View Download 0.329 a.74.1 Cyclin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle