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View Structure Prediction Details

Protein: IRC6
Organism: Saccharomyces cerevisiae
Length: 237 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IRC6.

Description E-value Query
Range
Subject
Range
IRC6 - Putative protein of unknown function; null mutant displays increased levels of spontaneous Rad52p fo...
IRC6_YEAST - Increased recombination centers protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
0.0 [1..237] [1..237]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLQYPQNKI LVLSDHPHNF LKTQFLQDLF HCSSTGISIV KDQTWENRYY KVHFDLYIDS  60
   61 CKEIPVWVEE FITPECEPLR NVMAGIILIT DIRQTKPQEL LHQFMIAAHR NTFVVLANVN 120
  121 EEVEQDEIDE LNEIWSNAFT NVIEFVNWKR SKPTVNHNDY GEKLGLDRIQ EIIDTHDWLN 180
  181 CEVQPATKIR EEIPNEMPLE QIIRNLQSAR LKYKSIENSS EADAFANEMA DELSRYL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle