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View Structure Prediction Details

Protein: YFR039C
Organism: Saccharomyces cerevisiae
Length: 510 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFR039C.

Description E-value Query
Range
Subject
Range
OSW7_YEAST - Outer spore wall protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OSW7 PE=1 SV=...
YFR039C - Putative protein of unknown function; may be involved in response to high salt and changes in carbon...
0.0 [1..510] [1..510]
gi|1209835 - gi|1209835|gb|AAB07828.1| repeat motif-containing gene [Borrelia burgdorferi]
gi|1209835|gb|AA... - repeat motif-containing gene [Borrelia burgdorferi]
0.009 [200..389] [2..181]

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Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAVFKVTTA LLACVFIARY LVCQQNGLGS FATDLQPICR HTEFSVGSLF DSKLVEGSAV  60
   61 SDYLVGKYSQ SIKPLIERYP NSSLKRIMGY FYRFWYNIFS FLRLNELCCS LHSKLGPLLN 120
  121 HLRIAWYYLK PYTDNVKNVL ENPFNSSTDW MKYGSFSADG TLTKPIFETD SETEDYEDDE 180
  181 NENEDEDEDE DEDDVGIEDE NKEYEFDGVQ DGHGNSQLVT AAILQDLSKI IIGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [235-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSHAELETYE AESLKMEYEA WIKAIDSKIH SAMALLDSEI QSVFEAEVQN KSIEITRNLD  60
   61 DLNTTVNEQL VFLDSKIKDI NCTSKFDPVQ NKIKYFDESG QVELEAYITK SSITSILKNY 120
  121 KIHLLDFEKS LFHSLDSFLT EMAKLAESIR LENVEVYEEW GDVMISQWSQ RMAYMDVRGL 180
  181 HLEDQYDPAY IEENHSNWLR FMELKKKVIS ER

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.07
Match: 1jkyA
Description: Anthrax toxin lethal factor, N- and C-terminal domains; Anthrax toxin lethal factor, middle domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 0.0794943241122666 bayes_pls_golite062009
catalytic activity 0.0773439754635474 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [447-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRLVKHDLDM TLILEWITKL KADFQNTKNN IQDTFLQRMN TADTLFKNRE LKEQLEEEFV  60
   61 RQEH

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.07
Match: 1jkyA
Description: Anthrax toxin lethal factor, N- and C-terminal domains; Anthrax toxin lethal factor, middle domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle