YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YFR035C
Organism: Saccharomyces cerevisiae
Length: 114 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for YFR035C.

Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASDKTKLC NKGMSRTSRT TTFVITPAFR ERDDEGANSL CKAFLNTFSN LKSGMFKCLL  60
   61 GVGAVGTFIS TFPQFFLLPC LLCVRCVCVC LCASISYAAS AIFSFSIFFF FCLA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.658 a.216.1 Description not found.
View Download 0.635 a.149.1 RNase III endonuclease catalytic domain
View Download 0.615 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.615 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.529 f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.524 a.215.1 Description not found.
View Download 0.432 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.427 d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.409 a.7.8 GAT domain
View Download 0.375 a.7.1 Spectrin repeat


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle