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View Structure Prediction Details

Protein: QCR6
Organism: Saccharomyces cerevisiae
Length: 147 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QCR6.

Description E-value Query
Range
Subject
Range
QCR6_YEAST - Cytochrome b-c1 complex subunit 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR6 P...
gi|151940797 - gi|151940797|gb|EDN59184.1| ubiquinol-cytochrome c oxidoreductase complex subunit [Saccharomyces cer...
QCR6 - Subunit 6 of the ubiquinol cytochrome-c reductase complex, which is a component of the mitochondrial...
gi|190406608 - gi|190406608|gb|EDV09875.1| ubiquinol cytochrome C oxidoreductase subunit 6 [Saccharomyces cerevisia...
2.0E-38 [1..147] [1..147]

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Predicted Domain #1
Region A:
Residues: [1-63]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMLELVGEY WEQLKITVVP VVAAAEDDDN EQHEEKAAEG EEKEEENGDE DEDEDEDEDD  60
   61 DDD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.289 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.554 a.64.1 Saposin
View Download 0.327 a.64.1 Saposin
View Download 0.377 a.144.1 PABC (PABP) domain
View Download 0.441 a.144.1 PABC (PABP) domain
View Download 0.422 a.101.1 Uteroglobin-like
View Download 0.294 a.60.2 RuvA domain 2-like
View Download 0.272 a.58.1 Chemotaxis receptor methyltransferase CheR, N-terminal domain
View Download 0.518 d.47.1 Ribosomal protein L11, N-terminal domain
View Download 0.370 a.64.2 Bacteriocin AS-48
View Download 0.256 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.255 a.4.1 Homeodomain-like
View Download 0.255 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.245 a.64.2 Bacteriocin AS-48
View Download 0.245 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.230 a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.229 a.64.1 Saposin
View Download 0.227 a.76.1 Iron-dependent represor protein, dimerization domain
View Download 0.219 a.5.6 Hypothetical protein MTH1615

Predicted Domain #2
Region A:
Residues: [64-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDEDEEEEEE VTDQLEDLRE HFKNTEEGKA LVHHYEECAE RVKIQQQQPG YADLEHKEDC  60
   61 VEEFFHLQHY LDTATAPRLF DKLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 276.0
Match: 1ezvH_
Description: Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle