| Protein: | ROG3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 733 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ROG3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..733] | [1..733] |
|
|
6.0E-83 | [6..684] | [6..585] |
|
|
6.0E-77 | [23..468] | [2..423] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MGFSSGKSTK KKPLLFDIRL KNVDNDVILL KGPPNEAPSV LLSGCIVLSI NEPMQIKSIS 60
61 LRLYGKIQID VPLERPQDAS SSSLSSSPPK IRKYNKVFYN YAWDNVNLKE YLSGLRGQSG 120
121 LAGSSSSSNI LG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [133-199] |
1 11 21 31 41 51
| | | | | |
1 TRQRAQSTSS LKSLKGSSSP SSCTLDKGNY DFPFSAILPG SLPESVESLP NCFVTYSMES 60
61 VIERSKN
|
|
Region B: Residues: [277-293] |
1 11 21 31 41 51
| | | | | |
1 ENYQYCDPFP PVISENR
|
|
Region C: Residues: [313-361] |
1 11 21 31 41 51
| | | | | |
1 GNGCFVNNPF FQPDHSFQDK WEIDTILQIP NSLSNCVQDC DVRSNIKVR
|
| Detection Method: | |
| Confidence: | 64.522879 |
| Match: | 1jsyA_ |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [200-276] |
1 11 21 31 41 51
| | | | | |
1 YSDLICRKNI RVLRTISPAA VELSETVCVD NSWPDKVDYS ISVPNKAVAI GSATPINISI 60
61 VPLSKGLKLG SIKVVLF
|
|
Region B: Residues: [294-312] |
1 11 21 31 41 51
| | | | | |
1 QVTELNLEDP LNESSGEFN
|
|
Region C: Residues: [362-444] |
1 11 21 31 41 51
| | | | | |
1 HKLKFFIILI NPDGHKSELR ASLPIQLFIS PFVALSIKPL SSSNLYSLFS TTNQKDENSS 60
61 QEEEEEYLFS RSASVTGLEL LAD
|
| Detection Method: | |
| Confidence: | 64.522879 |
| Match: | 1jsyA_ |
| Description: | Arrestin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [445-733] |
1 11 21 31 41 51
| | | | | |
1 MRSGGSVPTI SDLMTPPNYE MHVYDRLYSG SFTRTAVETS GTCTPLGSEC STVEDQQQDL 60
61 EDLRIRLTKI RNQRDNLGLP PSASSAAASR SLSPLLNVPA PEDGTERILP QSALGPNSGS 120
121 VPGVHSNVSP VLLSRSPAPS VSAHEVLPVP SGLNYPETQN LNKVPSYGKA MKYDIIGEDL 180
181 PPSYPCAIQN VQPRKPSRVH SRNSSTTLSS SIPTSFHSSS FMSSTASPIS IINGSRSSSS 240
241 GVSLNTLNEL TSKTSNNPSS NSMKRSPTRR RATSLAGFMG GFLSKGNKR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
