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View Structure Prediction Details

Protein: YFL064C
Organism: Saccharomyces cerevisiae
Length: 174 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFL064C.

Description E-value Query
Range
Subject
Range
YPR202W - Putative protein of unknown function with similarity to telomere-encoded helicases; YPR202W is not a...
YP202_YEAST - Putative uncharacterized protein YPR202W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
4.0E-92 [1..174] [65..238]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
4.0E-81 [1..150] [1..150]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVSDRRKFE KANFDEFESA LNNKNDLVHC PSITLFESIP TEVRSFYEDE KSGLIKVVKF  60
   61 RTGAMNRKRS FEKIVISVMV GKNVQKFLTF VEDEPDFQGG PIPSKYLIPK KINLMVYTLF 120
  121 QVHTLKFNRK DYDTLSLFYL NRGYYNELSF PCPGTLSRNS ECQAERQLYD AYFH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.743 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.712 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.595 a.47.2 t-snare proteins
View Download 0.554 a.7.1 Spectrin repeat
View Download 0.550 a.48.1 N-terminal domain of cbl (N-cbl)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle