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View Structure Prediction Details

Protein: HAC1
Organism: Saccharomyces cerevisiae
Length: 238 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAC1.

Description E-value Query
Range
Subject
Range
HAC1_YEAST - Transcriptional activator HAC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HAC1 PE=1...
HAC1 - Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog) that regulates the unfolded pro...
1.0E-58 [1..238] [1..238]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
8.0E-33 [1..191] [1..191]
gi|19070896, gi|... - sp|Q8SQ19|CRE3_BOVIN Cyclic-AMP responsive element binding protein 3 (Luman protein), gi|27805859|re...
3.0E-27 [3..207] [122..332]
gi|13365772 - gi|13365772|dbj|BAB39174.1| RISBZ4 [Oryza sativa]
gi|125580996 - gi|125580996|gb|EAZ21927.1| hypothetical protein OsJ_05580 [Oryza sativa Japonica Group]
gi|125538288 - gi|125538288|gb|EAY84683.1| hypothetical protein OsI_06055 [Oryza sativa Indica Group]
7.0E-27 [1..187] [85..273]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMTDFELTS NSQSNLAIPT NFKSTLPPRK RAKTKEEKEQ RRIERILRNR RAAHQSREKK  60
   61 RLHLQYLERK CSLLENLLNS VNLEKLADHE DALTCSHDAF VASLDEYRDF QSTRGASLDT 120
  121 RASSHSSSDT FT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1i84S_
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [133-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSPLNCTMEP ATLSPKSMRD SASDQETSWE LQMFKTENVP ESTTLPAVDN NNLFDAVASP  60
   61 LADPLCDDIA GNSLPFDNSI DLDNWRNPEA QSGLNSFELN DFFITS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle