YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CAK1
Organism: Saccharomyces cerevisiae
Length: 368 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAK1.

Description E-value Query
Range		 Subject
Range
gi|4096103 - gi|4096103|gb|AAD10483.1| p34cdc2 [Triticum aestivum]
 0.0 [2..364] [6..284]
CDC2_OXYRB - Cell division control protein 2 homolog OS=Oxybasis rubra GN=CDC2 PE=2 SV=1
 0.0 [2..364] [6..284]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 0.0 [2..364] [14..292]
CDC2A_ANTMA - Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2
 0.0 [2..364] [6..284]
CDC21_ORYSA, CC2... - Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice), (P29618) Cell divisi...
CDKA1_ORYSJ - Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1
 0.0 [2..364] [6..284]
gi|849068 - gi|849068|dbj|BAA09369.1| cdc2 homolog [Nicotiana tabacum]
 0.0 [2..364] [6..284]
CDC2_MAIZE - Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1
 0.0 [2..364] [6..284]
gi|3123616 - gi|3123616|emb|CAA76701.1| cyclin-dependent protein kinase p34cdc2 [Solanum lycopersicum]
 0.0 [2..364] [6..284]

Back

Predicted Domain #1
Region A:
Residues: [1-81] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLDSIDITH CQLVKSTRTA RIYRSDTYAI KCLALDFDIP PHNAKFEVSI LNKLGNKCKH  60
   61 ILPLLESKAT DNNDLLLLFP F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 243.9794
Match: 1aq1__
Description: Cyclin-dependent PK, CDK2
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [82-204] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEMNLYEFMQ MHYKRDRRKK NPYYDLLNPS IPIVADPPVQ KYTNQLDVNR YSLSFFRQMV  60
   61 EGIAFLHENK IIHRDIKPQN IMLTNNTSTV SPKLYIIDFG ISYDMANNSQ TSAEPMDSKV 120
  121 TDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 243.9794
Match: 1aq1__
Description: Cyclin-dependent PK, CDK2
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [205-271] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STGIYKAPEV LFGVKCYDGG VDVWSLLIII SQWFQRETSR MGHVPAMIDD GSDDMNSDGS  60
   61 DFRLICS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 243.9794
Match: 1aq1__
Description: Cyclin-dependent PK, CDK2
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [272-368] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IFEKLGIPSI QKWEEVAQHG SVDAFVGMFG ADGDGKYVLD QEKDVQISIV ERNMPRLDEI  60
   61 ADVKVKQKFI NCILGMVSFS PNERWSCQRI LQELEKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 243.9794
Match: 1aq1__
Description: Cyclin-dependent PK, CDK2
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle