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View Structure Prediction Details

Protein: BUD27
Organism: Saccharomyces cerevisiae
Length: 796 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUD27.

Description E-value Query
Range
Subject
Range
gi|10334767 - gi|10334767|gb|AAG16729.1|AF252857_1 factor H-binding inhibitor of complement surface protein PspC [...
5.0E-60 [55..631] [29..609]
gi|16554449, gi|... - gi|16554449|ref|NP_003377.1| zonadhesin isoform 3 [Homo sapiens], gi|12667414|gb|AAK01433.1|AF332977...
3.0E-53 [99..589] [535..1025]

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Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLAASVES TLKNLQDKRN FLSEQREHYI DIRSRLVRFI NDNDDGEEEG EGQGMVFGDI  60
   61 IISTSKIYLS LGYEYYVEKT KEEAITFVDD KLKLMEDAIE QFNLKIEEAK KTLDNLNHME 120
  121 DGNGIEED

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 28.017729
Match: PF02996
Description: Prefoldin subunit

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [129-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EANNDEDFLP SMEIREELDD EGNVISSSVT PTTKQPSQSN SKKEQTPAVG PKEKGLAKEK  60
   61 KSKSFEENLK GKL

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.62
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #3
Region A:
Residues: [202-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKRNDEVKKK VQPSKVDTEN VYTFADLVQQ MDQQDELEDG YIETDEINYD YDAFENSNFK  60
   61 VNDNYEEDDE DEDEEEYLN

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.62
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #4
Region A:
Residues: [281-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSIIPGFEAQ SSFLQQIQRL RAQKQSQDHE REEGDVNKSL KPILKKSSFA ENSDKKQKKK  60
   61 QVGFASSLEI 

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.62
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #5
Region A:
Residues: [351-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HEVENLKEEN KRQMQSFAVP MYETQESTGI ANKMTSDEFD GDLFAKMLGV QEADEVHEKY  60
   61 KEELINQERL EGEAS

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.62
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #6
Region A:
Residues: [426-656]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSNRRTRVSR FRKDRASKKE NTLSTFKQET TRSVENEVVE KEPVVGDIIE KEPVVGDVIE  60
   61 KEPVVGDVIE KEPAVTDIVE REPAVNDIVE RKPVVGDIIE KEPTINDIVE KEPEINSKSE 120
  121 FETPFKKKKL KSLQKPRSSK SMKKKFDPKI LENISDDDYD DDDDGNKKLL SNKSKNNTDE 180
  181 QDKFPSKIQE VSRSMAKTGA TVGSEPVRIT NVDYHALGGN LDDMVKAYSL G

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 14.72
Match: 1i3qA
Description: RBP1
Matching Structure (courtesy of the PDB):

Predicted Domain #7
Region A:
Residues: [657-796]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYDDDLEEDP GTIVEKLEDF KEYNKQVELL RDEIRDFQLE NKPVTMEEEE NDGNVMNDII  60
   61 EHEFPESYTN DEDEVALHPG RLQEEVAIEY RRLKEATASK WQSSSPAAHT EGELEPIDKF 120
  121 GNPVKTSRFR SQRLHMDSKP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle