| Protein: | VTC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 828 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VTC2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..828] | [1..828] |
|
|
0.0 | [1..807] | [1..790] |
|
|
0.0 | [1..786] | [1..768] |
|
|
0.0 | [1..808] | [1..728] |
|
|
0.0 | [240..823] | [1..583] |
|
|
0.0 | [1..557] | [1..463] |
|
|
1.0E-56 | [1..222] | [1..245] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MLFGVKLANE VYPPWKGSYI NYEGLKKFLK EDSVKDGSND KKARWDDSDE SKFVEELDKE 60
61 LEKVYGFQLK KYNNLMERLS HLEKQTDTEA AIKALDADAF QRVLEELLSE STELDNFKRL 120
121 NFTGFAKIVK KHDKLYPKYP SVKSLLEVRL KELPSHSEEY SPLLYRISFL YNILRSNFNT 180
181 ASEP
|
| Detection Method: |  |
| Confidence: | 49.958607 |
| Match: | PF03105 |
| Description: | SPX domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [185-238] |
1 11 21 31 41 51
| | | | | |
1 LASASKFSSI VSNDIDMNFR SFKFWVHNDN LMEVKTRILR HLPVLVYANV PSEN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [239-828] |
1 11 21 31 41 51
| | | | | |
1 DDLVNRFESD ISNNDEIVGS SSSTSSVEHG LGARSFDPLI NTLYFDNEHF ELYNDKLLKL 60
61 NSAPTLRLRW TGQLSDKPDI FLEKKTLIED EATGKSEFDL TKLQLKQKFI NGFIFEGDKK 120
121 FKEQTLKKLK ESGTAGRDLE RLEEDFSEIQ NFIIKNELQP VFRTVYTRTA FQIPGDDKIR 180
181 VTIDSNIVFI KEDSFDRERP IRDPNTWHRT DIDANVANPL KFLRGGEYAK FPYSVMEIKV 240
241 KSSLDSSMSA SSMISNVKLP KKHGQWLNDL TNSHLVKEIP KFSIFVQGVA SLYGDDEKLD 300
301 ILPFWLPDLE TDIRQDPKQA YEEEKKKLLK QKEIQKKIDG MRRLSNLKEP QHQAAVPVSQ 360
361 EENERITSQG DLEADGSSDE ETEQEPHSKR SKKVRRRKPK ATFLRILAGR DPKLMGVDSE 420
421 EEEIELPPGV KKPLNLLKNA GPVNVEAKVW LANERTFNRW LSVTSLLSVL TFSIYNSVKK 480
481 AEYPTLANYM AYVYFGLTIF CALWSYSIYM KRVDIIQQRS GQHLDAPLGP VLVSIVLFVT 540
541 LVVNFVMAFR NAAKSRQELQ IQNLEVPERI PEVLRPLQNY LFKLMGPSSD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [541-678] |
1 11 21 31 41 51
| | | | | |
1 PFWLPDLETD IRQDPKQAYE EEKKKLLKQK EIQKKIDGMR RLSNLKEPQH QAAVPVSQEE 60
61 NERITSQGDL EADGSSDEET EQEPHSKRSK KVRRRKPKAT FLRILAGRDP KLMGVDSEEE 120
121 EIELPPGVKK PLNLLKNA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [679-828] |
1 11 21 31 41 51
| | | | | |
1 GPVNVEAKVW LANERTFNRW LSVTSLLSVL TFSIYNSVKK AEYPTLANYM AYVYFGLTIF 60
61 CALWSYSIYM KRVDIIQQRS GQHLDAPLGP VLVSIVLFVT LVVNFVMAFR NAAKSRQELQ 120
121 IQNLEVPERI PEVLRPLQNY LFKLMGPSSD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
