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View Structure Prediction Details

Protein: YER152C
Organism: Saccharomyces cerevisiae
Length: 443 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YER152C.

Description E-value Query
Range
Subject
Range
gi|7576444 - gi|7576444|dbj|BAA94600.1| 1-aminocyclopropane-1-carboxylate synthase [Populus euramericana]
gi|7576444 - dbj|BAA94600.1| 1-aminocyclopropane-1-carboxylate synthase [Populus euramericana]
0.0 [3..441] [42..438]
gi|4996109, gi|1... - gi|4996109|dbj|BAA78333.1| 1-aminocyclopropane-1-carboxylic acid synthase [Pyrus pyrifolia], gi|1477...
0.0 [3..439] [46..439]
gi|3643540 - gi|3643540|emb|CAA09477.1| ACC synthase [Citrus sinensis]
0.0 [4..442] [39..434]
gi|8570043 - gi|8570043|dbj|BAA96743.1| 1-aminocyclopropane-1-carboxylate synthase [Prunus persica]
0.0 [3..439] [47..440]
gi|3668146, gi|1... - gi|6688886|emb|CAB65314.1| 1-aminocyclopropane-1-carboxylate synthase [Nicotiana tabacum], gi|366814...
0.0 [3..440] [48..443]
gi|7209853 - gi|7209853|dbj|BAA92351.1| 1-aminocyclopropane-1-carboxylate synthase [Malus x domestica]
0.0 [3..436] [46..437]
gi|7576442 - gi|7576442|dbj|BAA94599.1| 1-aminocyclopropane-1-carboxylate synthase [Populus euphratica]
0.0 [3..440] [44..440]
gi|18252337 - gi|18252337|gb|AAL66200.1|AF386518_1 1-aminocyclopropane 1-carboxylate synthase 4 [Pyrus communis]
0.0 [3..439] [46..439]
gi|3955254 - gi|3955254|gb|AAC83147.1| 1-aminocyclopropane-1-carboxylate synthase [Nicotiana glutinosa]
0.0 [3..440] [48..443]

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Predicted Domain #1
Region A:
Residues: [1-11]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYKEINFFK G

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [337-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RATVLTSALK KYMPLGTEIM PLKGGYFTWI TLPPAYNAME ISTILAKKFN VILADGSNFE  60
   61 VIGDEKNWGQ SCFRLSISFL EVDDIDRGIE LFGAVCKSHA ITNNITM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 122.0
Match: 1iaxA_
Description: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.53236054463719 bayes_pls_golite062009
transferase activity 0.233280663075854 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [12-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPSSRLLPRE AVIQATAAIL GPETREYDND PYNRHPLTYG SDEGALWVRE QICTFLNDQL  60
   61 FKFENGARSR TRADYLNLNS GASYGMLNIL LQTTLPHNGY TRQAFIITPT YFLINNCFTD 120
  121 AGFKGKMTAI NEQGHDSIDF ESLISALEQH EAEPQPHSTT EMIQGPKLTK KVYRYVMYCI 180
  181 PTFANPSGNT YSLETRRRLI DIARKYDMLI ITDDVYDILD YTTPSDELPS PPLRMVHIDR 240
  241 STAPSGEDSF GNTVSNATFS KLIAPGLRFG YHESINANLA RQLSKGGANV SGGTPSQLNS 300
  301 MIVGEMLRSG AAQRCIAHLR SVYSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 122.0
Match: 1iaxA_
Description: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle