| Protein: | COX15 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 486 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COX15.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..486] | [1..486] |
|
|
0.0 | [16..459] | [27..473] |
|
|
0.0 | [26..451] | [13..413] |
|
|
0.0 | [50..451] | [36..407] |
|
|
0.0 | [2..468] | [9..453] |
|
|
0.0 | [29..451] | [53..479] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MLFRNIEVGR QAAKLLTRTS SRLAWQSIGA SRNISTIRQQ IRKTQLYNFK KTVSIRPFSL 60
61 SSPV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.488 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.536 | a.4.1 | Homeodomain-like |
| View | Download | 0.497 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.523 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.430 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.419 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.417 | a.112.1 | Description not found. |
| View | Download | 0.409 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.407 | a.77.1 | DEATH domain |
| View | Download | 0.386 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.384 | a.64.1 | Saposin |
| View | Download | 0.378 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.367 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.354 | a.4.1 | Homeodomain-like |
| View | Download | 0.344 | a.77.1 | DEATH domain |
| View | Download | 0.340 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.326 | a.77.1 | DEATH domain |
| View | Download | 0.323 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.314 | d.75.1 | tRNA splicing endonuclease EdnA, N-terminal domain |
| View | Download | 0.311 | g.15.1 | Ovomucoid/PCI-1 like inhibitors |
| View | Download | 0.308 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.302 | a.64.1 | Saposin |
| View | Download | 0.293 | a.4.1 | Homeodomain-like |
| View | Download | 0.287 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.283 | a.77.1 | DEATH domain |
| View | Download | 0.272 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.271 | a.4.1 | Homeodomain-like |
| View | Download | 0.269 | a.3.1 | Cytochrome c |
| View | Download | 0.255 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.248 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.247 | g.13.1 | Crambin-like |
| View | Download | 0.246 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.242 | a.4.1 | Homeodomain-like |
| View | Download | 0.240 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.240 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.239 | a.77.1 | DEATH domain |
| View | Download | 0.237 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.236 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.233 | a.39.1 | EF-hand |
| View | Download | 0.227 | a.77.1 | DEATH domain |
| View | Download | 0.224 | a.4.12 | TrpR-like |
| View | Download | 0.222 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.219 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.214 | a.65.1 | Annexin |
|
Region A: Residues: [65-486] |
1 11 21 31 41 51
| | | | | |
1 FKPHVASESN PIESRLKTSK NVAYWLIGTS GLVFGIVVLG GLTRLTESGL SITEWKPVTG 60
61 TLPPMNQKEW EEEFIKYKES PEFKLLNSHI DLDEFKFIFF MEWIHRLWGR AIGAVFILPA 120
121 VYFAVSKKTS GHVNKRLFGL AGLLGLQGFV GWWMVKSGLD QEQLDARKSK PTVSQYRLTT 180
181 HLGTAFFLYM GMLWTGLEIL RECKWIKNPV QAISLFKKLD NPAIGPMRKI SLALLAVSFL 240
241 TAMSGGMVAG LDAGWVYNTW PKMGERWFPS SRELMDENFC RREDKKDLWW RNLLENPVTV 300
301 QLVHRTCAYV AFTSVLAAHM YAIKKKAVIP RNAMTSLHVM MGVVTLQATL GILTILYLVP 360
361 ISLASIHQAG ALALLTSSLV FASQLRKPRA PMRNVIITLP HSSKVTSGKI LSEASKLASK 420
421 PL
|
| Detection Method: | |
| Confidence: | 232.136677 |
| Match: | PF02628 |
| Description: | Cytochrome oxidase assembly protein |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
