YRC Public Data Repository - Protein Structure Prediction

Protein:	YER137C
Organism:	Saccharomyces cerevisiae
Length:	148 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YER137C.

Description	E-value	Query Range	Subject Range
gi\|49644636, gi\|... - gi\|50310955\|ref\|XP_455500.1\| unnamed protein product [Kluyveromyces lactis], gi\|49644636\|emb\|CAG9820... gi\|49644636\|emb\|... - unnamed protein product [Kluyveromyces lactis NRRL Y-1140]	72.0	[0..10]	[146..5]
gi\|44984709 - gi\|44984709\|gb\|AAS53552.1\| AFR181Wp [Ashbya gossypii ATCC 10895] gi\|44984709, gi\|... - gi\|45198699\|ref\|NP_985728.1\| AFR181Wp [Ashbya gossypii ATCC 10895], gi\|44984709\|gb\|AAS53552.1\| AFR18...	63.0	[0..19]	[142..10]
gi\|49656943, gi\|... - gi\|50425361\|ref\|XP_461274.1\| hypothetical protein DEHA0F22638g [Debaryomyces hansenii CBS767], gi\|49...	56.0	[0..12]	[147..22]
orf19.515, orf19... - orf19.515 CGDID:CAL0000082 Assembly 19, Contig19-10053 (92443, 91997) CDS, reverse complemented, tra... gi\|68477170, gi\|... - gi\|68477170\|ref\|XP_717378.1\| hypothetical protein CaO19.515 [Candida albicans SC5314], gi\|68476981\|r...	56.0	[0..12]	[142..3]

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Predicted Domain #1

Region A:
Residues: [1-148]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCESSNKTEN DIVRLSQAMD VLAKLIISKQ KDGSQLQVEY EHKLKELEKF INLLLGLHES  60
   61 TVGSMMNTSV LDMVLRNGIE IMEKDDQKYA LIPIKAKEEA DKTTSTIQGV TSKKSSKKKK 120
  121 NKIKCSFCHE AGHTRAHCGA RLTVIPKK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits